Roseobacter denitrificans: RD1_3079
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Entry
RD1_3079 CDS
T00376
Symbol
rbsA
Name
(GenBank) ribose transport ATP-binding protein
KO
K10562
rhamnose transport system ATP-binding protein [EC:7.5.2.-]
Organism
rde
Roseobacter denitrificans
Pathway
rde02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
rde00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
RD1_3079 (rbsA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rde02000
]
RD1_3079 (rbsA)
Transporters [BR:
rde02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Rhamnose transporter
RD1_3079 (rbsA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
AAA_22
SMC_N
AAA_29
RsgA_GTPase
AAA_23
MukB
AAA_30
AAA_15
AAA_19
TPR_NPHP3
DPOA2_OB
Zeta_toxin
Motif
Other DBs
NCBI-ProteinID:
ABG32590
RoseoBase:
RD1_3079
UniProt:
Q164K3
LinkDB
All DBs
Position
complement(2950667..2952202)
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AA seq
511 aa
AA seq
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MSKHTLSADVPVVSMDAITKTFPGVKALDQVRLDLYPGQVTALVGENGAGKSTTVKILTG
IYQPDGGTIRIAGAPVILNTPNDASAAGITAIHQETVLFDELTVAENIFIGHAPRTKWGL
IDKAAMHRKARGLLDEIGAPFDTGAYLRELGIANKHLVAIARALSVDARVVIMDEPTAAL
SHKEIEELYELVETLKAQGKAILFISHKFDEIFRIADRYTVFRDGAFVSDGLISDIDQDA
LVKMMVGRAVDHIFPERQAALGEEVLQVAGYAHPTEFAGIGFTLKRGEILGFYGLVGAGR
SELMQALFGITRPSKGVTKINGDIRVIRSPADAVNNGIVYVPEDRGKQGVVIGLPIFQNI
TLPSLGRTSQSGFLRMAEEFKLARDYAERLDLRAAALDQDVGNLSGGNQQKVVIAKWLAT
QPQVIILDEPTKGIDIGSKAAVHEFMAELAGQGLAVIMVSSEIPEVIGMSDRVIVMREGR
IAAEVQGEDLTPETLVRHAAGIAPAPESIPA
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaagcacaccctatctgcagatgtgcccgtggtatccatggatgccatcaccaag
acgtttccgggggtcaaagcgctggatcaggtcaggcttgatctttaccccgggcaggtc
acggcccttgtgggcgaaaacggggcggggaaatccacgaccgtcaaaatcctgaccgga
atttatcagccggacgggggcaccatccggatcgcgggcgcgccggttattctgaacact
ccgaatgacgcctccgccgcagggatcacggccatccatcaggaaacggtgttgtttgat
gagcttacggttgctgaaaacatcttcatcggtcacgcgccgcgcacaaaatggggtttg
atcgacaaggcagcgatgcaccgcaaggcgcgcggactgctggacgagatcggtgcgcct
ttcgacacgggtgcctatctgcgcgaactgggcattgcgaataaacatctggtggccatc
gcccgcgccttgtcggtggatgcccgcgttgtgatcatggacgagccgacggcagcgctg
tcccacaaggaaatcgaagagctttatgaactggtcgaaaccctgaaagcgcagggaaag
gcgatcctgttcatcagccataaattcgacgagattttccgcattgctgaccgctacacg
gtgtttcgcgacggggcctttgtcagcgatggcctgatcagtgacattgatcaggacgcg
ctggttaaaatgatggtggggcgggcggtcgatcacatctttcccgaacgtcaggcagcg
cttggcgaggaggtgctgcaagttgcaggctatgcgcatcccacggaatttgccggtatc
gggttcacgctgaaacgcggtgaaatcctcgggttttacgggcttgtcggggcagggcgc
tccgaattgatgcaagcgctctttggcatcacccggcccagcaaaggggtgacaaagatc
aatggggacattcgcgtgatccgctctcctgcggatgccgtaaacaacgggattgtctat
gtccccgaggatcgcggcaagcagggtgtggtgatcgggttgccgatttttcagaacatc
accttgccctcacttggccgcacgtcgcaatcgggctttttgcgcatggccgaagaattc
aaactggcgcgcgactatgccgagcggctggatctgcgcgccgccgcccttgatcaggat
gtgggcaacctgtcggggggcaaccagcaaaaagtcgtcattgccaagtggctggccacg
cagccgcaggtcatcattctggatgaaccgaccaagggcatcgacatcggctccaaggcg
gcggtgcacgagttcatggccgagcttgcaggccaaggcctcgcggtcatcatggtcagt
tccgagatacccgaagtcatcggcatgtccgatcgtgtgatcgtgatgcgcgagggtcgc
atcgccgccgaggtgcagggcgaagatctgacgccagaaacccttgtccgccacgccgcg
ggcattgcacccgctccagaaagcatccccgcatga
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