KEGG   Roseobacter denitrificans: RD1_3091
Entry
RD1_3091          CDS       T00376                                 
Symbol
xerD
Name
(GenBank) tyrosine recombinase XerD
  KO
K04763  integrase/recombinase XerD
Organism
rde  Roseobacter denitrificans
Brite
KEGG Orthology (KO) [BR:rde00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:rde03036]
    RD1_3091 (xerD)
Chromosome and associated proteins [BR:rde03036]
 Prokaryotic type
  Chromosome partitioning proteins
   Other chromosome partitioning proteins
    RD1_3091 (xerD)
SSDB
Motif
Pfam: Phage_integrase Phage_int_SAM_1 Phage_int_SAM_5 Phage_int_SAM_4
Other DBs
NCBI-ProteinID: ABG32601
RoseoBase: RD1_3091
UniProt: Q164J2
LinkDB
Position
2964604..2965575
AA seq 323 aa
MAAHGTWISAFLEAQAAELGAARNTLLAYGRDLKDFEGYLHHRTLDFATATQGDVEAYLI
ACDAQGLSKATRARRLSAVKQLYRFAFEEGWRSDNPALQITGPGRDRKLPKTLSEAEVDR
LLEAARTSGRNAADRARNTCLMELLYATGMRVSELVSLPVSAARGDPRMLLIRGKGGKER
MVPLSPPARDATSEWLQLRDEKEAQKKTEGHPPSRFLFASRGVSGHLTRHRFYLLIKELA
VNAGVSPSKVTPHTLRHAFATHLLANGADLRSIQTLLGHADVATTEIYTHVLEARLSELV
LTHHPLAQDDTRAPGDKTALDGS
NT seq 972 nt   +upstreamnt  +downstreamnt
atggcggcgcacggtacgtggatttccgctttccttgaggcgcaggctgcggaacttggc
gccgcgcgcaacacgcttttggcctatggtcgtgacctcaaggatttcgagggctacctg
catcaccgcactctggactttgccaccgcgacgcagggcgatgtcgaggcctatctgatc
gcctgtgacgcgcaggggctttcaaaggcgacgcgggcgcgcaggctttcggcggtcaag
cagctttatcgttttgccttcgaggaaggctggcgcagcgacaacccggccttgcagatc
acaggcccgggacgcgaccgcaaactgcccaaaaccctgtccgaagcagaagtggacagg
ctgcttgaggccgcccgcacctcggggcgcaacgcggcagaccgggcgcgcaacacctgc
ctgatggaactgctctatgcgactggcatgcgcgtcagcgagttggtcagcctgcccgtc
tctgcggcgcggggcgatccgcgcatgttgttgatccgcggcaagggtggcaaggagcgg
atggtgcccctgtcgccccctgcccgcgatgccacatcagagtggttgcagctgcgcgac
gagaaagaggcccagaaaaagaccgaagggcatccgccctcccggtttctgttcgcatca
cgcggtgtgtccgggcatctgacgcggcatcgtttctatctgctgatcaaggagttggca
gtcaatgcgggcgtcagcccgtccaaggtcaccccccacacgctgcgtcatgctttcgcc
acgcatctgctggcaaatggcgcggatttacgctcgattcagacgctgttgggtcacgcg
gatgtggccacgacagaaatctacacccatgtgctggaggccagactgtccgaattggtg
ctcacgcaccacccgctggcgcaagacgatacgcgcgcaccgggtgacaaaaccgcgctg
gatggatcataa

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