Roseobacter denitrificans: RD1_3102
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Entry
RD1_3102 CDS
T00376
Name
(GenBank) transcriptional regulator, TetR family, putative
KO
K09017
TetR/AcrR family transcriptional regulator
Organism
rde
Roseobacter denitrificans
Brite
KEGG Orthology (KO) [BR:
rde00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rde03000
]
RD1_3102
Transcription factors [BR:
rde03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
RD1_3102
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TetR_C_3
TetR_N
TetR_C_29
TetR_C_24
TetR_C_13
TetR_C_21
Motif
Other DBs
NCBI-ProteinID:
ABG32612
RoseoBase:
RD1_3102
UniProt:
Q164I1
LinkDB
All DBs
Position
2979322..2979930
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AA seq
202 aa
AA seq
DB search
MTKTETRIQKKNQAAILSAGLQVFSQFGFRGSTLDQIAAEAGLSKPNILYYFASKDAIYR
ALLTQLLDEWLQPIYEIDASGDPVEELLSYARRKLEMSRDYPRESRLFANEVIQGAPRIG
DALSGELRRVVNKIAAIIDGWIREGRIQPVDPHHLIFSIWSVTQHYADFDVQVRAILLDQ
DPFPGAEQHLEDMLRRMLTPQT
NT seq
609 nt
NT seq
+upstream
nt +downstream
nt
atgacaaagactgaaacccgcatacagaaaaagaaccaggcggccattctcagcgccggg
ttgcaggtcttttcgcaatttggatttcgcggctccactctggatcagatcgctgccgag
gcgggactgtcaaagccgaacatcctgtattacttcgcctccaaggatgcgatctatcgc
gcccttttgacccagttgctggatgagtggctacagcccatctatgagattgatgccagt
ggcgacccggtcgaagagctgctttcctatgcgcggcgcaaactagagatgagccgggat
tatccccgcgaaagccgcctttttgccaatgaggtgatacagggtgcgccgcgtatcggc
gacgccctcagcggtgagttgcgccgggtcgtgaacaagatcgccgcgatcatcgacggc
tggatccgcgagggtcgcattcagccggtggacccgcatcacctgatcttttccatctgg
tccgtgacccagcactacgcagattttgacgttcaggtgcgcgccatcctgctggatcag
gacccttttcccggcgccgagcaacacctcgaagacatgctgcggcggatgctgacccct
caaacctaa
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