KEGG   Roseobacter denitrificans: RD1_3104
Entry
RD1_3104          CDS       T00376                                 
Name
(GenBank) glutamate synthase, small subunit, putative
  KO
K17722  dihydropyrimidine dehydrogenase (NAD+) subunit PreT [EC:1.3.1.1]
Organism
rde  Roseobacter denitrificans
Pathway
rde00240  Pyrimidine metabolism
rde00410  beta-Alanine metabolism
rde00770  Pantothenate and CoA biosynthesis
rde01100  Metabolic pathways
Module
rde_M00046  Pyrimidine degradation, uracil => beta-alanine, thymine => 3-aminoisobutanoate
Brite
KEGG Orthology (KO) [BR:rde00001]
 09100 Metabolism
  09104 Nucleotide metabolism
   00240 Pyrimidine metabolism
    RD1_3104
  09106 Metabolism of other amino acids
   00410 beta-Alanine metabolism
    RD1_3104
  09108 Metabolism of cofactors and vitamins
   00770 Pantothenate and CoA biosynthesis
    RD1_3104
Enzymes [BR:rde01000]
 1. Oxidoreductases
  1.3  Acting on the CH-CH group of donors
   1.3.1  With NAD+ or NADP+ as acceptor
    1.3.1.1  dihydropyrimidine dehydrogenase (NAD+)
     RD1_3104
SSDB
Motif
Pfam: Pyr_redox_2 Fer4_20 Pyr_redox NAD_binding_8 Pyr_redox_3 DAO AlaDh_PNT_C HI0933_like GIDA 2-Hacid_dh_C FAD_binding_2 MurD-like_N Thi4 FAD_oxidored FAD_binding_3 Fer4_7 Lycopene_cycl ApbA UDPG_MGDP_dh_N 3HCDH_N
Other DBs
NCBI-ProteinID: ABG32614
RoseoBase: RD1_3104
UniProt: Q164H9
LinkDB
Position
complement(2981292..2982626)
AA seq 444 aa
MISQRTPGIVAERLSAEELARNFADLHAPLEPHEAAVAADRCYFCHDAPCVTACPTEIDI
PLFIRQISTGTPEAAAKTIFDQNILGGMCARVCPTEDLCEQACVREMAEGKPVEIGRLQR
YATDTLMQRDIHPYTRAAATGKRIAVVGAGPAGLSCAHRLALLGNDVVVYDGHAKPGGLN
EYGIAAYKSTDDFAAREVAWLLDIGGITVETGKVLGGDLALDALAAQYDAVFLAVGLGGV
NALNLEGDDKSGVTDAVSFIETLRQSRDLTKLPVGRNVVVIGGGMTAVDAAVQSKLLGAE
NVTIAYRRDRAAMSASRYEQDLAASHGVKLMFNVQPVAIHGNGAAAEIELEYTASVDGRL
VGTGEKTRLTADQVFRAIGQTLTMEGGLETRNGKIAVSGAGRTSLDRVWAGGDCALGGDD
LTVTAVAEGRDAAMDIHAALNGSV
NT seq 1335 nt   +upstreamnt  +downstreamnt
atgattagccaacgtacaccgggcatcgtcgccgaaaggctgagcgcagaagaactggcc
cgtaattttgccgaccttcacgcacctctggagccacatgaagcagcagttgctgcggat
cgctgttatttctgccatgacgcgccctgcgtgacggcctgtcccacggaaatcgacatc
ccgctcttcatccgccagatcagcacaggcacccccgaagcagcagccaaaacgattttt
gaccagaacattctgggcggcatgtgcgcgcgggtctgtccgaccgaagatctgtgcgag
caggcctgcgtgcgtgaaatggcagagggcaaaccggtcgagatcgggcgcctgcaacgc
tatgcgaccgatacgctgatgcagcgcgacattcacccctatacccgtgcggcggccacg
ggaaagcggatcgcggttgtgggcgcggggcctgctggtctttcttgcgcgcacaggttg
gcgctgcttggcaatgatgttgtagtctatgatggccacgccaaaccgggcggtctgaat
gaatatgggatcgcagcctacaaatccacggatgattttgccgcgcgcgaggtcgcgtgg
ctgttggacatcggtggcatcacggttgaaacgggcaaggtgttgggcggtgatctggcg
ctggatgctttggcggcgcaatatgacgctgtgtttctggccgtgggtctgggcggggtg
aacgcgctcaatcttgagggggatgacaaatccggcgtcacggacgcggtgtctttcatc
gaaacgctgcgccagtcgcgcgatctgaccaagctgcccgtgggccgcaatgtggtggtc
atcggcgggggcatgacggccgtggacgctgcggttcagtccaaattgctgggcgcggag
aatgtcacgatcgcctatcggcgcgaccgcgccgcgatgagtgccagccgctacgaacag
gaccttgccgcctcccatggcgtcaagctgatgttcaatgtgcagcccgtcgccattcat
ggcaacggggcagcggcggagatcgaactggaatataccgcatcggttgatggccgactt
gtcgggacaggcgaaaagacgcgcctgacggcggatcaggtattccgtgccatcgggcag
acgctgaccatggaaggggggcttgaaacaaggaacggcaagatcgctgtgtctggtgca
gggcggaccagtctggaccgggtctgggccgggggcgattgcgcccttggcggcgatgat
ctgaccgtgacagccgtggccgaagggcgcgacgcggcaatggatattcatgcagcactg
aacgggagcgtataa

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