Roseobacter denitrificans: RD1_3119
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Entry
RD1_3119 CDS
T00376
Name
(GenBank) membrane protein, putative
KO
K07091
lipopolysaccharide export system permease protein
Organism
rde
Roseobacter denitrificans
Pathway
rde02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
rde00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
RD1_3119
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rde02000
]
RD1_3119
Transporters [BR:
rde02000
]
ABC transporters, prokaryotic type
ABC-2 type and other transporters
Lipopolysaccharide transporter
RD1_3119
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LptF_LptG
GTA_holin_3TM
Motif
Other DBs
NCBI-ProteinID:
ABG32627
RoseoBase:
RD1_3119
UniProt:
Q164G6
LinkDB
All DBs
Position
2995504..2996631
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AA seq
375 aa
AA seq
DB search
MVRLDRYMLSQLLVLFGFFALVLVAILWINRGVSLFDELISDGQSALVFLEFTALGLPKL
ITTVLPIATFAAAVYVTNRMNNESELTVLQATGSGPVRLARPVLVFGLIVFLMASMLHHV
LMPLAQQQLGHRQNEIAQNATSRLLTEGRFLHPSEGVTFYTQEIDDDGVLRDVFLSDRRS
VEEGVIYTAAHAYLIRDDERTSLIMVDGLAQRLTTATDRLATANFRDFSFDISALVQNDV
SQRLDPDKMTTFQLLTPWDELSRETGRSIGKITQSFHARIADPLFCIVAALIGFSTLMIG
GFSRFGVWREVGVAFVLLVAIDGLRSTLQSPVRRDPELWPLLYLPTFISALLVIAMLWVA
ARPRGSFFGLLRRSG
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
gtggtcagactcgacagatacatgctgtcgcaacttctggttctatttggcttcttcgcg
ctggtgctggttgccattctctggatcaatcgcggcgtttccctgtttgacgaattgatc
agcgacgggcaatccgcccttgttttcctcgaatttaccgcgttgggcttgccgaaactg
atcaccacggtgctgcccatcgcgacatttgccgccgcggtttacgtcaccaaccgcatg
aacaacgaaagcgagttgacggtgttgcaggccacgggttccggccctgtgcggctggcc
cgcccggttcttgttttcgggctgatcgtgtttttgatggcgtcgatgttgcaccatgtt
ctgatgccgcttgcccagcagcaactggggcacaggcaaaacgagatcgctcagaacgcg
acctcccggttgttgacggagggacggtttctgcacccttcggaaggcgtgacgttttac
acgcaggagattgatgatgacggtgttttgcgcgacgttttcctgtctgaccggcgcagt
gtcgaggaaggcgtcatctacaccgccgcacatgcctatctgatccgtgacgacgagcgc
acgtcgttgatcatggtggatgggcttgcacaacggttgacgacggcgaccgatcggctg
gccacagcgaacttccgcgatttttcctttgatatctcggcgctggtgcaaaatgatgtc
agtcagcggcttgatcccgacaaaatgaccacctttcagctgctcaccccgtgggatgaa
ttgtcacgcgaaacagggcgcagcatcggcaagatcacccagagctttcatgcgcgcatt
gcggatccgctgttctgtatcgtcgccgcgttgatcggattttcaaccctgatgatcggc
ggtttttcacgtttcggcgtctggcgcgaagtcggcgttgcctttgtcctgctggttgcg
attgatggtctgcgcagcaccctgcaaagccctgtgcggcgggaccctgagctttggcct
ctgctgtatctgccgaccttcatcagcgcgttgctcgtgattgccatgctctgggttgct
gcgcggccaaggggatccttcttcggcctgctgcggagaagtggatga
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