Roseobacter denitrificans: RD1_3120
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Entry
RD1_3120 CDS
T00376
Name
(GenBank) permease YjgP/YjgQ family, putative
KO
K11720
lipopolysaccharide export system permease protein
Organism
rde
Roseobacter denitrificans
Pathway
rde02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
rde00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
RD1_3120
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rde02000
]
RD1_3120
Transporters [BR:
rde02000
]
ABC transporters, prokaryotic type
ABC-2 type and other transporters
Lipopolysaccharide transporter
RD1_3120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LptF_LptG
DUF905
Beta-prop_Vps41
Motif
Other DBs
NCBI-ProteinID:
ABG32628
RoseoBase:
RD1_3120
UniProt:
Q164G5
LinkDB
All DBs
Position
2996628..2997725
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AA seq
365 aa
AA seq
DB search
MILHLYFARRFASWLLIAFIALSALIALVDLVDQTRRFADRGVSATGIFELVILNTPQTI
SQILPLIVLLATVAFFLSLARSSELIATRASGRSAMGALVAPVSVVILLGTLATTTLNPI
VAATSKKYNELSQIYRTGGVSTLSISTEGLWLRQATDDGQMVIRAWRSNPDASVLFDVTF
LAYEVIGTPVRRIHADSAELKDGAWLLRNVKDWPLARGINSEGNATEHRSLTIPSSLTVE
RIRESFGHPSTISIWEMTDFIKQLNQAGFSSLQHRVWLQSELARPLFLVAMVLIASAFTM
RHTRFGGTGVAVLAAVLLGFALYFVRSFGLILGENGQLPVYLAAWAPPIASVLLAFGPLL
HAEDG
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atgatcctgcatttgtatttcgcgcgccgctttgcatcctggctgctgatcgccttcatc
gcgctttccgcgctgatcgctttggtcgatctggtagatcaaacgcggcgctttgcggat
cggggcgtcagtgccacgggtattttcgaactcgtcatcctgaatacgccgcagacgatc
agccagattttgccgctgatcgttctgctcgccactgtcgcgtttttcctgagccttgcg
cggtcctctgaactgatcgccacgcgggcctcgggccgctccgcgatgggggctttggtc
gcaccggtgagtgttgtgatcctgctgggcacgcttgcgacaacgacgctgaacccgatt
gtggctgcgacctcgaaaaaatacaacgagctgtcgcagatttaccggacgggcggcgtg
tcgaccctgtccatttccaccgaagggctgtggctgcgtcaggccacggatgacgggcag
atggtgatccgggcatggcggtccaacccggatgcctcggtgctgtttgacgtcacattt
ctggcctatgaggtgatcggcaccccggtgcgccgcattcacgccgacagcgccgaactc
aaggacggcgcatggctcttgcgcaacgtcaaggattggccactggcgcgcggcatcaat
tcggaaggcaatgcaacagaacaccggagcctcacgatcccgtccagcctgacggtggag
cgcattcgcgaaagcttcgggcaccccagcacgatttccatctgggagatgaccgacttc
atcaaacagttgaaccaggccggattttcatccctgcaacaccgcgtctggctgcaatca
gaactggcacggcccttgtttctcgttgcgatggtactgatcgccagcgcattcaccatg
cgccacaccagatttggcggcaccggggtcgcggttcttgcggcggtgctgctgggtttt
gcactctatttcgtgcgcagtttcgggctgatcctcggggaaaacggccagttgcctgtt
tacctcgccgcatgggcaccaccaatcgcgtcggtcttgctggctttcggcccgctgcta
catgcagaggacggatga
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