Roseobacter denitrificans: RD1_3180
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Entry
RD1_3180 CDS
T00376
Name
(GenBank) conserved hypothetical protein
KO
K02291
15-cis-phytoene synthase [EC:
2.5.1.32
]
Organism
rde
Roseobacter denitrificans
Pathway
rde00906
Carotenoid biosynthesis
rde01100
Metabolic pathways
rde01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
rde00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
RD1_3180
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
rde01006
]
RD1_3180
Enzymes [BR:
rde01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.32 15-cis-phytoene synthase
RD1_3180
Prenyltransferases [BR:
rde01006
]
Terpene biosynthesis
Squalene/phytoene synthase
RD1_3180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
Motif
Other DBs
NCBI-ProteinID:
ABG32686
RoseoBase:
RD1_3180
UniProt:
Q164A7
LinkDB
All DBs
Position
complement(3048462..3049241)
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AA seq
259 aa
AA seq
DB search
MSFDADVTACAAIVEKADPDRFAAVMASPVAARPVLFVLYAFNVEVSRAPWLTQETMIAE
MRLQWWRDALEEIGQGGQARRHEVVTPLSRFLSEPATQVLDRLVAARRWDIYKDAFEDAA
HFDNYLNETAAGLMWVAACALDPDLTPQGTVEAMVRACGRATGLARFLQAVPALEAHNRI
PLVDGRAEAIADLARTALNALPAPKLLKRTLGEAAKPAITEAFLTRSLLKQVVQDPRRVA
SGQLQVHPMRRAALLWRWS
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atgagctttgatgcggatgtgaccgcctgcgccgcaatcgtggaaaaggcagacccggac
cggttcgccgccgtcatggccagcccggttgcggcgcgccctgttctctttgtgctttat
gccttcaacgtggaggtttcgcgtgccccttggctcacacaagagacgatgattgccgag
atgcgcctgcaatggtggcgcgatgcgcttgaggaaatcgggcagggcgggcaggcccgc
cgccacgaggtcgtcaccccgctgagccgttttctgtcagagccggcaacgcaggtgctt
gaccggctcgtcgcggcccggcgatgggacatctacaaggatgcctttgaggacgctgca
cattttgacaattacctcaatgaaacagccgccggtttgatgtgggttgcggcctgcgcg
ctcgacccggacctgaccccgcagggcacggtggaagccatggtacgggcctgcggtcgc
gcaacggggcttgcacggtttttgcaggccgtgcccgcgttggaagcccacaatcgcatt
cccttggttgatggccgcgcggaggccatcgccgatcttgcgcgcacggcactcaatgcg
ctgcctgccccaaagctgctgaaacgcaccttgggggaggcggcgaaaccggccatcacg
gaggcgtttttgacccggagccttctgaaacaggtggtacaggatccgcgccgcgtggcg
tccgggcaattgcaggtccacccgatgcggcgcgcggcactcttatggcgctggtcgtga
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