Roseobacter denitrificans: RD1_3263
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Entry
RD1_3263 CDS
T00376
Symbol
rhlE
Name
(GenBank) ATP-dependent RNA helicase, putative
Organism
rde
Roseobacter denitrificans
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
ERCC3_RAD25_C
AAA_19
Helicase_RecD
Motif
Other DBs
NCBI-ProteinID:
ABG32764
RoseoBase:
RD1_3263
UniProt:
Q163S9
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All DBs
Position
3128176..3129693
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AA seq
505 aa
AA seq
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MRADVRAAAGQECVRKLRIHMIKFSELNLNPKVLKAIDEAGYETPTPIQAGAIPPALAGR
DVLGIAQTGTGKTASFTLPMITLLARGRARARMPRSLVLCPTRELAAQVAENFDTYTKHL
KLTKALLIGGVSFKEQDKLIDKGVDVLIATPGRLLDHFERGKLLLTGVQIMVVDEADRML
DMGFIPDIERIFSLTPFTRQTLFFSATMAPEIERITNTFLSAPERIEVARQATTSETIEQ
GVLMFKASRKDREGTEKRKVLRALIDAEGEKCTNAIVFCNRKTDVDIVAKSLKKYNYDAA
PIHGDLDQSQRTRTLDGFRDGSLKFLIASDVAARGLDVPAVSHVFNFDVPGHAEDYVHRI
GRTGRAGRDGKAIMICVPRDERNLEDIERLVQREIPRLDNPLGTKEAPKEKAPDGEAAAS
EKPKRTRTRAPRKSDKPQETEAEKTPEEPTVDATPAQEPAQKPARSRGGRNRNANTGKDR
GPGVIGLGDHTPEFIGLSFKDRIGG
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atgcgggccgatgtgagagctgccgcgggccaagaatgtgtccgcaaattacggatacat
atgataaaattctctgagttgaacctcaatcctaaagtattgaaggcaattgacgaagcc
gggtacgagacccccaccccgatccaagctggtgccatccctcccgccctcgcagggcgg
gacgttctgggcattgcgcaaaccgggaccgggaaaaccgccagtttcacgctgccgatg
attacccttttggcgcgtggacgcgcccgggcccggatgccgcgcagtcttgtgctgtgc
ccgacgcgtgaactcgcagcacaagttgccgagaacttcgacacgtacacgaaacacctg
aaactgaccaaggcgctgctgattggcggcgtgtcgttcaaggaacaggacaagctgatc
gacaagggtgtcgatgttctgattgcgacaccgggacggttgctggaccatttcgaacgc
ggcaaactgctgctgaccggcgtgcagatcatggtggtggacgaagcggacagaatgctc
gatatgggattcattcctgacatcgaacgcatcttcagcctgacgccctttacccgccag
acgctgttcttttcggccaccatggctccggaaattgagcggatcacgaacaccttcctg
tccgcacccgaacgcatcgaggtcgcgcgtcaggcaacgaccagcgagaccatcgagcag
ggtgtgctgatgttcaaggcctcgcgcaaggaccgggaaggcacggaaaagcgcaaggtg
ctgcgtgccctgattgatgccgaaggtgaaaaatgcaccaatgccatcgtcttttgcaac
cgcaagactgacgtggacatcgttgccaagtcactgaaaaaatacaactatgacgcagcc
cctattcacggtgatctggatcagagccagcggacacgcacgcttgacgggtttcgcgat
ggctcgttgaaattcctgatcgcttctgatgtggcggcgcgcggccttgacgtgcctgcg
gtgagccatgtcttcaattttgatgtgcccggccatgccgaggactatgtccaccgcatt
ggccggacgggtcgtgcggggcgggacggcaaggcgatcatgatctgcgtgccgcgcgac
gagcgcaaccttgaagatatcgagcgccttgtgcagcgcgaaattccgcggctggacaat
ccactgggcaccaaggaagcgccgaaggagaaagcgccggacggtgaggccgccgcgtcg
gaaaagccgaaacggacccggacacgtgcaccgcgcaaaagcgacaaaccgcaggaaaca
gaggccgaaaaaacgcccgaagaacccacggtggacgccacacctgcgcaggagcccgca
caaaaacctgcccgctcccggggcggtcgcaaccgcaacgccaacacgggcaaggatcgc
gggccgggtgtcatcggactgggcgatcacacgccggagttcatcgggctcagcttcaaa
gatcggatcggcggctga
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