Roseobacter denitrificans: RD1_3295
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Entry
RD1_3295 CDS
T00376
Symbol
mvaB
Name
(GenBank) hydroxymethylglutaryl-CoA lyase
KO
K01640
hydroxymethylglutaryl-CoA lyase [EC:
4.1.3.4
]
Organism
rde
Roseobacter denitrificans
Pathway
rde00280
Valine, leucine and isoleucine degradation
rde00650
Butanoate metabolism
rde00907
Pinene, camphor and geraniol degradation
rde01100
Metabolic pathways
rde01120
Microbial metabolism in diverse environments
rde04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
rde00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
RD1_3295 (mvaB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
RD1_3295 (mvaB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
RD1_3295 (mvaB)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
RD1_3295 (mvaB)
Enzymes [BR:
rde01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.4 hydroxymethylglutaryl-CoA lyase
RD1_3295 (mvaB)
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Paralog
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GFIT
Motif
Pfam:
HMGL-like
Motif
Other DBs
NCBI-ProteinID:
ABG32796
RoseoBase:
RD1_3295
UniProt:
Q163P7
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Position
complement(3155221..3156093)
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AA seq
290 aa
AA seq
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MSLGNCEIYEVGPRDGLQNEEREIPVRDKIALIDCLSRAGFNRIEAASFVSPKRVPQMAG
SGEVLAGISRAAGVRYAALAPNMQGYRDACRAGADEIAIFASASEGFSKANINASIAESL
ERFAPILEEARHIDLPVRGYVSCVVACPYDGAVAPAQVAEVADKLFAMGCYEVSLGDTIG
AGTPDSVARMLLAVRDVVPVGRLAGHFHDTNGRAIENIDAALSLGVRVFDAAVGGLGGCP
FAPGASGNVATETLARHLAALGYETGLDPEVIAEAAALARSMRTQPEPAQ
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgagtttgggaaactgtgagatatacgaagtgggcccgcgcgacgggttgcagaatgaa
gagcgcgagataccggtacgcgataaaatcgcgctcatcgactgcctgagccgcgccggg
ttcaaccggatcgaggctgcgagtttcgtctctcccaagcgggtgccgcagatggcaggg
tccggcgaggtgctggccggtatctcaagggcggcgggggtgcgttacgcggcacttgcg
ccaaacatgcagggatacagggacgcctgccgtgccggcgccgatgagatcgcgattttt
gcctccgcttcggaggggttttccaaagccaacatcaacgccagcattgccgaaagcctt
gagcgttttgcgcccattctagaagaggcgcgtcacattgatctgcccgtgcgcggctat
gtgtcctgcgtggtggcatgcccttatgacggggccgtggctccggcgcaggtggccgag
gtggcagacaagctgtttgcgatgggctgttatgaggtcagcctcggcgacacaatcggc
gcaggcacgccggacagtgttgcgcgcatgttgcttgcggtgcgcgatgtggtgccggtc
ggtcggctggccgggcattttcatgacacaaatggccgcgcgatcgaaaacatcgacgct
gcgctcagccttggggtgcgagtctttgatgccgctgtgggcggtttgggcggatgccct
ttcgcacccggagcctccgggaatgtggccaccgaaacactggcacgccatctcgcggcg
ctggggtatgaaaccggtcttgatcccgaagtgatcgcggaggctgcggctttggcccgg
tccatgcgcacgcagcctgaacccgcgcagtag
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