Roseobacter denitrificans: RD1_3297
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Entry
RD1_3297 CDS
T00376
Symbol
mccA
Name
(GenBank) methylcrotonyl-CoA carboxylase, alpha subunit
KO
K01968
3-methylcrotonyl-CoA carboxylase alpha subunit [EC:
6.4.1.4
]
Organism
rde
Roseobacter denitrificans
Pathway
rde00280
Valine, leucine and isoleucine degradation
rde01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rde00001
]
09100 Metabolism
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
RD1_3297 (mccA)
Enzymes [BR:
rde01000
]
6. Ligases
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.4 methylcrotonoyl-CoA carboxylase
RD1_3297 (mccA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
Biotin_carb_N
Biotin_carb_C
Biotin_lipoyl
Dala_Dala_lig_C
ATP-grasp
Biotin_lipoyl_2
HlyD_3
ATP-grasp_3
GARS_A
ATP-grasp_4
Motif
Other DBs
NCBI-ProteinID:
ABG32798
RoseoBase:
RD1_3297
UniProt:
Q163P5
LinkDB
All DBs
Position
complement(3156784..3158721)
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AA seq
645 aa
AA seq
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MFNCILVANRGEIACRVMGTAQALGVRCIAVYSDADAGAKHVAMADAAVRIGGPAPVDSY
LRADAIIAAARATGAQAIHPGYGFLSENPEFVEAVETAGLVFIGPSAQAIRAMGLKDAAK
ALMIDAGVPVVPGYHGADQADAQLQQQADRIGYPVLIKAVAGGGGKGMRLVSAASEFSEA
LAAARSEAQAAFGNSDVLIEKFIPQPRHIEVQVFGDGTDVVHLFERDCSLQRRHQKVIEE
APAPGMTPEVREAMGRAAVRAAKAIGYKGAGTVEFIVDGTGDLRPDGFYFMEMNTRLQVE
HPVTEAITGVDLVEWQLRVAAGEPLPCGQDDLAITGHAFEARLYAEDVRAGFLPATGTLH
HLVFPSIARADSGVRAGDAISPYYDPMIAKLIVAGPTRAIALARLRRALKDTQVAGSVTN
LEFLGALAAHEGFAAGAFDTGLIERDFATLTPAADPQIAHMVAAAMQVAGLDKPAAMAGF
ALWVPFAHQVRLGWQDQEHLLSVEVLDQHSQRWTHGAQSVTATRHAGQWSIDGAPLPFCY
MAAGQVTVFDHYGLVFDIHDPLLAGATEGRSGNLIEAPMPGLVKMLAAVPGQTVLRGDRL
AVLEAMKMEHALLAARDGKIAEVLAQEGDQVSAGAALIRLEEEQA
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
gtgtttaactgcattttggtggccaatcggggcgaaattgcctgccgggtgatggggacg
gcgcaggcccttggggtgcgctgcatcgccgtttattcggacgcggatgcaggtgcgaaa
cacgtggcaatggcggatgctgccgtgcggatcggcggtcccgcacctgtggacagttac
ctgcgcgccgatgccatcatcgcagccgcacgcgccaccggggcgcaagcgatccacccg
ggctatgggtttctgagcgaaaaccccgagtttgtcgaagcggtcgaaaccgccgggttg
gttttcatcggcccctcggcgcaggcgatccgggcgatgggcctcaaggacgcggccaag
gccctgatgatcgacgcgggcgtgcccgtcgtgccgggctatcacggtgcggatcaggcg
gacgcacagttgcagcagcaggctgacaggatcggctatccggtcttgatcaaggccgtt
gcagggggcggtggcaaaggcatgcgtctggtcagcgccgcgtcagaattcagcgaggca
ctggcggcggcgcgttccgaggcgcaggctgcattcggcaattctgatgttctgatcgaa
aagttcattccgcagccgcgccatatcgaggtgcaggttttcggcgatggtactgatgtc
gtgcacttgtttgaacgggactgttcgctgcagcgccgccatcagaaagtgatcgaagaa
gcccccgcacccggtatgaccccggaggtcagagaggccatgggccgcgccgccgtgcgt
gctgccaaggcaatcggctacaaaggggccggaacggtggagttcatcgttgatggcacg
ggcgatctgcgccccgatgggttttatttcatggagatgaacacccgccttcaggtcgaa
caccccgtcaccgaggccatcacgggcgttgatctggtcgaatggcaattgcgcgtggcg
gcgggcgaacctttgccgtgcggtcaggatgatctggcgatcaccggacatgcctttgaa
gcgcgtctttatgccgaagatgtgcgcgcgggattcctgcctgccaccggaacgctgcat
catctggtttttccgtcgattgcgcgggcagacagcggggtgcgcgcaggcgatgcgatc
agcccctattacgacccgatgattgccaagctgatcgtcgctggccccacccgcgccatt
gcgctggcgcggttgcgtcgggcattaaaagacactcaggtggcgggcagcgtgaccaat
ctggaatttctgggcgccttggcggcccatgaggggttcgccgcaggggcattcgacacg
ggcctgattgagcgtgattttgcgacactcacacctgctgccgacccgcagatcgctcat
atggtggcggcggcgatgcaggttgcggggttggacaaaccggcggcgatggcaggcttt
gccctctgggtgccatttgcgcatcaggtgcggctgggctggcaggatcaggaacatctg
ctgtccgttgaggtgctggatcagcacagccagcgctggacccacggcgcgcaaagcgtc
accgcgacgcgacatgcgggccagtggtcgattgatggcgcacccctgccgttctgttac
atggcggcagggcaggtcacggtttttgatcactacggtctggtttttgacatccatgat
ccgttgctggcgggcgcgaccgaaggccgcagtggcaatctgatcgaagcgccaatgccg
ggtctggtaaagatgttggcggcggtgcccggacagaccgttttacggggggatcggctg
gccgtgttggaagcgatgaagatggagcacgcgctgctggctgcgcgcgacggcaagatc
gccgaagtgctggcgcaggaaggtgatcaggtcagcgcgggtgctgccctcatccgactt
gaggaggaacaggcatga
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