Roseobacter denitrificans: RD1_3309
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Entry
RD1_3309 CDS
T00376
Symbol
lpcC
Name
(GenBank) lipopolysaccharide core biosynthesis mannosyltransferase
KO
K12989
mannosyltransferase [EC:2.4.1.-]
Organism
rde
Roseobacter denitrificans
Brite
KEGG Orthology (KO) [BR:
rde00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
rde01005
]
RD1_3309 (lpcC)
Lipopolysaccharide biosynthesis proteins [BR:
rde01005
]
Core region
RD1_3309 (lpcC)
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Gene cluster
GFIT
Motif
Pfam:
Glycos_transf_1
Glyco_trans_1_4
GT4-conflict
Glyco_trans_1_2
Glyco_transf_4
Motif
Other DBs
NCBI-ProteinID:
ABG32810
RoseoBase:
RD1_3309
UniProt:
Q163N3
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Position
3171302..3172372
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AA seq
356 aa
AA seq
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MSPAQIPALREIEVIAPNFKRRHSGVTSTVIRLVPLQARDIAIVASGPDLPGEVPNLPPR
GLLRLPRSGPSGARVWHARRNVEMVAGLALKYLAGKRLKLLFTSAAQRRHTGFTRWLIRQ
MDAVIATSAKSAGYLERDATVIHHGIDTVLFSPVENREALRATLDLPVDGPLVGCFGRIR
HQKGNDLFIKAMISIFSEVPHGRALMMGRATEEHKTYLQELKDEVAAAGLSDRILFRDEV
PIDQLSLHFQALDLYIAPQRWEGFGLTPLEAMACGAPVVATRVGAFEELIEDGVTGNLVE
VDDVDAITANLRRLLVDEEMRASFATAARENVVKNFSIEKEAASILHIYHGLLGRA
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgtcccctgcccagatccccgcccttcgagagatcgaggtgattgcgcccaatttcaaa
cggcggcattccggcgtcacatcgaccgtcatccgtcttgtgccgttgcaggcgcgcgac
atcgcgattgtggcttcgggccctgacctgcccggcgaagtgcccaacctgcccccccgt
ggattgctgcgcctgccccgctccggcccctctggcgcgcgcgtctggcatgcccggcgc
aatgtggaaatggtcgccgggctggcgctgaaatatcttgcggggaaacggttgaaactg
cttttcacctccgccgcgcagcgccggcatacgggctttacccgctggctcattcgccag
atggatgcggtcatcgccacatccgcgaaatcggcgggctacttggaacgcgacgcaact
gtcatacaccacggtatcgacaccgtgcttttcagccctgtcgagaaccgggaggctctg
cgcgccacacttgatttgccagtggatggccctttggtcggctgtttcgggcgcattcgc
catcagaaaggcaacgatctttttatcaaagcgatgatcagcatcttttctgaggtgccc
cacggcagggcgctgatgatgggtcgcgcgaccgaagagcataaaacctatctgcaggag
ctcaaggatgaggtcgcagccgccgggttgtcagaccgcatcctgtttcgcgatgaggtg
ccaatcgaccaactgtcgctgcattttcaggcgcttgacttatacattgcaccgcagcgt
tgggagggctttggcctgacaccgctggaggccatggcgtgcggcgcgcccgtggtcgcc
acacgcgtcggcgcgtttgaagagctgatcgaggacggcgtgaccggtaatctggtcgag
gttgatgatgttgacgcgatcacagccaacttgcggcgactgctggtcgatgaagagatg
cgcgccagttttgccacggccgcacgtgaaaacgtggtcaagaatttttcaatcgagaag
gaagccgcgtccattctccacatctaccatggtctgctcgggcgcgcttga
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