Roseobacter denitrificans: RD1_3345
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Entry
RD1_3345 CDS
T00376
Symbol
comL
Name
(GenBank) competence lipoprotein ComL, putative
KO
K05807
outer membrane protein assembly factor BamD
Organism
rde
Roseobacter denitrificans
Brite
KEGG Orthology (KO) [BR:
rde00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rde02000
]
RD1_3345 (comL)
Transporters [BR:
rde02000
]
Other transporters
Pores ion channels [TC:
1
]
RD1_3345 (comL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YfiO
TPR_6
TPR_18
TPR_14
TPR_16
TPR_19
Motif
Other DBs
NCBI-ProteinID:
ABG32844
RoseoBase:
RD1_3345
UniProt:
Q163J9
LinkDB
All DBs
Position
complement(3211863..3212729)
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AA seq
288 aa
AA seq
DB search
MSWRGSAQRFSAVALLIVGMAGCTSDPGRTTGTIFNPQEVPLEAFEAEQIFERGEFELTR
NRPDDAAFYFAEIERLYPYSDWARRALIMQAFSYHQDQDYPNSRSAAQRFIDFYPDDDDA
AYAQYLLALSYYDQIDEVGRDQGLTFQALQALRQTIERYPDSEYARSSILKFDLAFDHLA
GKEMEIGRYYLRRDHFAAAINRFRVVVEDFQTTSHTPEALHRLVEAYLSLGLTDQAQTAA
AILGYNYQSTVWYQDSFALLTGQGLRPEATGDGWLGQVYRQTVRGEWL
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgagttggcgaggatctgcacagcgtttttcagcggttgcgctcttgattgtcggtatg
gccggatgcaccagcgatcccggccgcacgacaggtacgattttcaatccgcaggaagtc
ccgctggaggctttcgaggcagaacaaatctttgagcgcggcgaattcgaactgacccgt
aaccgccctgacgatgccgcgttttactttgccgagatcgagcgcctttatccctattcg
gattgggcgcgccgggctttgatcatgcaggcgttttcctatcatcaggatcaggactat
cccaacagcaggtcagctgcacagcgattcatcgacttttatcccgatgatgatgatgcg
gcctatgcgcaatatttgctggcgctcagctattacgatcagatcgacgaagtcgggcgc
gatcaggggctgacgtttcaggcgcttcaggcgttgcgccaaaccatcgaacgctatccc
gacagcgaatatgcgcgctcctccatcctgaaatttgacctcgcgtttgaccatcttgcg
ggcaaggaaatggaaattggccgctattacttgcgccgcgaccatttcgccgctgcgatc
aaccgcttccgtgtggtggttgaagattttcagaccacctcccacacgccggaagcgttg
caccggctggttgaggcgtatctgtccctcggtctgacggatcaggcgcaaacggcagcg
gcgatccttgggtataattatcaatccactgtgtggtatcaggacagctttgcattgctg
accgggcaggggttgcgacccgaagcaaccggggacggatggcttggccaggtgtaccgt
cagaccgtgcgcggcgaatggctctga
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