Roseobacter denitrificans: RD1_3355
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Entry
RD1_3355 CDS
T00376
Symbol
murC
Name
(GenBank) UDP-N-acetylmuramate--alanine ligase
KO
K01924
UDP-N-acetylmuramate--alanine ligase [EC:
6.3.2.8
]
Organism
rde
Roseobacter denitrificans
Pathway
rde00550
Peptidoglycan biosynthesis
rde01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rde00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
RD1_3355 (murC)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rde01011
]
RD1_3355 (murC)
Enzymes [BR:
rde01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.8 UDP-N-acetylmuramate---L-alanine ligase
RD1_3355 (murC)
Peptidoglycan biosynthesis and degradation proteins [BR:
rde01011
]
Precursor biosynthesis
Amino acid ligase
RD1_3355 (murC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase
Mur_ligase_M
Mur_ligase_C
F420_oxidored
MurD-like_N
3HCDH_N
Motif
Other DBs
NCBI-ProteinID:
ABG32852
RoseoBase:
RD1_3355
UniProt:
Q163J1
LinkDB
All DBs
Position
complement(3220427..3221833)
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AA seq
468 aa
AA seq
DB search
MNAATKLPGDVGPIHFVGIGGIGMSGIAEVLLNHGYRVQGSDLKPTRITRRLEELGARVF
VGQRPENIEDAEVIVISSAIKPGNAELDAARARGLPIVRRAEMLGELMRLKSNIAVAGTH
GKTTTTTMVATLLDAGEFDPTVVNGGIIHAYGSNARKGEGEWMVVEADESDGTFNRLPAT
IAIVTNIDPEHMEHWGDFDTLRQGFLDFVSNIPFYGVAVCCTDHPEVQALVGKITDRRVI
TYGFNAQADVRAVNLRYAGGVAYFDVALQAEGTVIEGCSLPMPGDHNVSNALSAIAVARH
LGMKAEVIKTALAAFGGVNRRFTRVGEIDGVTIIDDYGHHPVEIAAVLKAARQATEGRVI
AVHQPHRYSRLSSLFDDFCACFNDADVVGIAEVYAAGEDPIPGAGRDDLVAGLIRHGHRH
ARAVVGEDDLERLVREQTRPGDMVVCLGAGTISAWANGLPARLQKGAA
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgaatgcagcgacaaaactgcccggcgatgtcgggccgatacatttcgtcggcatcggc
ggcatcggcatgtccggcattgccgaggtcttgctcaaccatgggtaccgggttcagggg
tctgatctgaagccaacacgcatcacgcgccgcctcgaagaacttggcgcgcgtgtgttc
gttggccagcgtcccgagaacattgaagatgccgaagtcattgtgatctccagcgcgatc
aaaccgggcaatgcggaactggatgcggcccgtgcgcgtggtctgcccatcgtgcgccgg
gccgagatgctgggcgaactgatgcgcctgaaatcgaacattgccgttgcgggcacgcat
ggcaaaaccaccacgaccaccatggtggcgaccttgctggatgcgggggagtttgacccc
accgtggtcaacggcggcatcatccacgcctatggctcgaacgcgcgcaagggcgagggt
gaatggatggtggtggaagccgatgaaagcgatggcaccttcaatcgcttgcctgcgacc
atcgcgatcgtgaccaatatcgaccccgaacatatggaacactggggggattttgacacg
ctgcgtcaggggttcctcgattttgtctccaacatcccgttttacggcgttgcggtctgt
tgcacggatcatcccgaggtgcaggccttggtgggtaagatcaccgaccggcgggtgatc
acctacgggtttaacgcgcaggccgatgtgcgcgcggtcaacctgcggtatgcggggggc
gtggcctatttcgatgtggccctgcaggccgagggcactgtgatcgagggctgcagcctg
ccgatgccgggggatcacaacgtctccaacgcgctgtcggccattgcggtggcgcgccat
ctgggcatgaaggccgaagtgatcaaaaccgcccttgccgcgttcggcggtgttaaccgt
cggtttacccgtgtgggcgaaattgacggggtgacgattatcgacgactacggccaccac
ccggttgaaattgcggcggtgctgaaagccgcgcggcaggccacggagggccgcgtgatc
gcggtgcatcaaccgcatcgctattcgcgcctttctagcctctttgacgatttctgcgcc
tgtttcaacgatgcggatgtggtcggtatcgccgaggtttacgccgcgggcgaagatccc
ataccgggtgctggtcgcgatgatctggtggccgggctgatccgccacgggcatcgccac
gcacgcgccgtggtgggcgaagacgatctggaacgtctggtgcgcgaacaaacccgcccc
ggcgatatggttgtctgcctcggggccgggacgatcagcgcctgggcgaacggtttgccg
gcgcggctgcagaaaggggccgcgtga
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