Roseobacter denitrificans: RD1_3460
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Entry
RD1_3460 CDS
T00376
Name
(GenBank) calcium binding hemolysin protein, putative
KO
K01406
serralysin [EC:
3.4.24.40
]
Organism
rde
Roseobacter denitrificans
Pathway
rde01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
rde00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01503 Cationic antimicrobial peptide (CAMP) resistance
RD1_3460
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rde01002
]
RD1_3460
Enzymes [BR:
rde01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.24 Metalloendopeptidases
3.4.24.40 serralysin
RD1_3460
Peptidases and inhibitors [BR:
rde01002
]
Metallo peptidases
Family M10
RD1_3460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HemolysinCabind
Motif
Other DBs
NCBI-ProteinID:
ABG32946
RoseoBase:
RD1_3460
UniProt:
Q162Z7
LinkDB
All DBs
Position
complement(3329975..3331003)
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AA seq
342 aa
AA seq
DB search
MDIYGTNRNDVITGTSRGEDIYGRNGDDILRGGAGNDALYGGNGNDILDGGAGNDEMVGG
AGRDTFIFGSGRDSIEYFRSDDTIELNAGLGVRSFSDILSVARTVDGGDSTLLDFGGGNS
LLIEDVSIDDLSAGQFSFGQTAQPPAPAATAPGSGTDGNDRLTGTSGRDVIDGGAGNDDI
RGFGGNDEIDGGGGNDRLFGNNGNDDLDGGDGNDRLSGDNGNDDLDGGRGNDRLFGNNGR
DDLSGGAGRDLLNGGRGNDTLEGGAGADTFVFNFGRDVIEDFSTEDVIRLTGAARNADLG
DVLANARVVDGGDDVLLDFGGGNTLRLEDTQISQISTDDFIF
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atggatatctacggcacgaacagaaacgacgttatcacaggcacctcgcgtggagaggac
atttacggccggaacggcgatgacatcctccgcggcggcgcgggcaacgacgctctttac
ggggggaacggcaacgacatactcgatggcggggccgggaacgacgagatggtgggcggt
gccgggcgcgacacctttatcttcggctcgggtcgcgactcgatcgagtactttcgctcc
gatgacaccatcgagctgaacgccggactgggcgtgcgcagcttctccgacatcctttcc
gtcgcccgcacggttgacggtggtgacagcaccctgcttgacttcggtggcggcaacagc
ctgctgatcgaggacgtcagcatcgacgacctgtccgcagggcagttcagcttcggccag
acggcacagccgcctgcgcctgctgctacggctccgggcagcggaacggatggcaatgac
cggctgacagggacgagcggtcgggacgtgatcgatggcggcgcgggcaatgacgacatc
cgcggttttggcgggaacgacgagattgacggtggcggcggtaatgaccgcctcttcggc
aataatggcaacgacgacctcgacggtggggatgggaacgaccggctgtcgggtgacaac
ggtaatgatgatctcgatggaggacgcggcaatgaccgactcttcggcaacaacgggcgc
gacgatctgagcggcggagccgggcgggacttgctcaacggcgggcgcggtaacgacaca
ctcgagggcggcgcaggcgcagataccttcgtgttcaacttcgggcgtgacgtgatcgag
gacttcagcaccgaagacgttatccgcctgacgggcgcggcccgaaatgccgatcttggc
gacgtgctcgccaacgcccgtgtggtcgacggtggcgatgatgtgctgctcgacttcggt
ggcggcaacacgctgcggcttgaggacacccaaatatcgcagatctcgaccgacgacttc
attttctga
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integrated database retrieval system
