Roseobacter denitrificans: RD1_3540
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Entry
RD1_3540 CDS
T00376
Symbol
clpA
Name
(GenBank) ATP-dependent Clp protease, ATP-binding subunit ClpA, putative
KO
K03694
ATP-dependent Clp protease ATP-binding subunit ClpA
Organism
rde
Roseobacter denitrificans
Brite
KEGG Orthology (KO) [BR:
rde00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
rde03110
]
RD1_3540 (clpA)
Chaperones and folding catalysts [BR:
rde03110
]
Heat shock proteins
HSP100
RD1_3540 (clpA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA
AAA_lid_9
ClpB_D2-small
AAA_5
Clp_N
AAA_22
AAA_16
Sigma54_activat
RuvB_N
Mg_chelatase
TniB
AAA_7
AAA_18
nSTAND3
AAA_3
AAA_14
bpMoxR
TIP49
Zeta_toxin
RNA_helicase
IstB_IS21
AAA_25
AAA_33
TsaE
AAA_6
ResIII
AAA_17
NACHT
AAA_28
Torsin
PanZ
SKI
IPT
Motif
Other DBs
NCBI-ProteinID:
ABG33021
RoseoBase:
RD1_3540
UniProt:
Q162S2
LinkDB
All DBs
Position
3401344..3403665
Genome browser
AA seq
773 aa
AA seq
DB search
MPSFSTTLEQAIHSALALANARRHEFATLEHLLLALIDEPDASRVMKACSVDTDDLRKTL
VEFVDEDLSNLVTDIDGSEAVPTAAFQRVIQRAAIHVQSSGRTEVTGANVLVAIFAERES
NAAYFLQEQDMTRYDAVNFIAHGVAKDPAYGEPRPVSGAPEAEEETQGVTDGEKKESALE
KYCVDLNAKSREGDIDPLIGRDSEVERCIQVLCRRRKNNPLLVGDPGVGKTAIAEGLARK
IVAGETPEVLAKTTIYSLDMGALLAGTRYRGDFEERLKAVVSELEDHKDAVLFIDEIHTV
IGAGATSGGAMDASNLLKPALAGGKLRTMGSTTYKEFRQHFEKDRALSRRFQKIDVNEPS
VEDAVKILRGLKPYFEDHHAVKYTADAIKTSVELASRYINDRKLPDSAIDVIDEAGAAQH
LIVAAKRRKTIGTKEIENVVAKIARIPPKNVSKDDAEVLKDLEGSLKRVVFGQNAAIEAL
SSAIKLARAGLREPEKPIGNYLFAGPTGVGKTEVAKQLADTLGVELLRFDMSEYMEKHAV
SRLIGAPPGYVGFDQGGMLTDGVDQHPHCVLLLDEMEKAHPDVYNILLQVMDHGKLTDHN
GRTVDFRNVVLIMTSNAGAAEQAKEAIGFGRDRREGEDTAAIERTFTPEFRNRLDAVISF
APLPKEVILRVVEKFVLQLEAQLMDRNVTIELTKPAAEWLADKGYDAKMGARPLGRVIQE
HIKKPLAEDLLFGKLAKGGVVKVGVKNGEIDLKIEGPDKPRLAGDKPPLLTAE
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
gtgccttcattttcaacgacactggaacaggcaattcattcggcattggcactcgcaaac
gcgcgtcgccacgaatttgccacgctggaacatttgttgctggccctgattgacgagcct
gacgcctcccgcgtgatgaaagcgtgcagcgtggataccgatgatctccgcaagacactt
gtcgaatttgtcgacgaggatctgagcaacctggtaaccgacatagacggatccgaagcc
gtgccgaccgctgctttccagcgcgtcatccagcgcgccgcgatccatgtgcaatcctcg
ggccgaacagaagtgaccggcgcgaatgtgctggtcgccatttttgccgagcgcgaaagc
aatgccgcatacttcctgcaggaacaggatatgacgcgctatgatgcggtgaacttcatt
gcgcatggcgtagcgaaagaccctgcatatggtgaaccgcgccccgtgtccggcgcgccc
gaagccgaagaagaaacacaaggcgtgaccgacggcgaaaagaaagaaagcgcgcttgaa
aaatactgcgtcgatttgaacgcaaagtcgcgcgagggcgatattgatccgctcattggc
cgcgactcagaggtcgagcgttgtatccaagtgctgtgtcggcgccgcaagaacaatcct
ttgctggtcggcgaccccggggtcgggaaaacagcaatcgctgaagggctggcgcgcaaa
atcgttgcgggcgaaacacctgaggtgcttgccaagacgaccatttattccctcgacatg
ggcgcgctgctggccggcacgcgctatcgcggtgatttcgaagagcgtctgaaggccgtc
gtgtccgagttggaagatcataaagacgcggtgcttttcatcgacgaaattcataccgtg
atcggtgcaggggcgacatcgggtggcgcgatggatgcctccaatctgctcaaacccgcc
ttggcgggcggcaaactgcgcaccatggggtccacgacctacaaggaatttcgccagcat
ttcgagaaggaccgcgcgctgagccgccggttccagaagatcgacgtgaatgagccatct
gtcgaagatgcagtgaaaatcctgcggggtctgaaaccctatttcgaggaccaccacgcg
gtgaaatacacggccgatgcgatcaagacgagcgtcgaactggcctcgcgttacatcaac
gaccgcaagctgcccgacagcgccattgacgtgatcgacgaagcgggcgccgctcagcat
ttgatcgtggccgcgaaacggcgcaaaacgattggcaccaaggagatcgaaaacgtcgtt
gctaagatcgcgcgtattccgccgaagaacgtgtccaaagacgatgcagaagtcctgaag
gacctcgaagggtcgctgaaacgcgtggtgtttggtcaaaacgcagcgattgaagcgctt
tcatccgccatcaaactggcacgtgccggtttgcgcgaaccggaaaagcccattggcaac
tatctctttgccgggcccaccggtgtcggcaaaactgaagtcgccaagcaactggcggat
acgctgggggttgaacttctacgcttcgatatgtccgaatatatggagaagcacgcggtt
tcgcgcctgatcggtgccccaccgggatatgtcggcttcgatcaaggcggcatgttgacc
gatggcgttgatcagcatccgcattgcgtattgcttcttgatgaaatggaaaaagcgcat
ccggatgtctacaacattctcctgcaggtcatggatcacggcaaactgacagaccacaat
gggagaaccgttgatttccgaaacgtcgttctgatcatgacctccaacgcgggcgccgct
gaacaggccaaggaagcgattggctttgggcgtgatcgacgcgaaggcgaagataccgcc
gccattgaacgcacattcacgcctgaattccgcaacaggttggatgcggtgatcagcttt
gcgccgctacccaaagaggtgatcttgcgcgtggtcgaaaagtttgtgctgcaactcgaa
gcgcagttgatggacagaaatgttacaatcgaactgacaaaacccgccgcagagtggctc
gcggacaaaggttacgatgcgaaaatgggcgcgcgccccttgggccgtgtcattcaagag
cacatcaagaaaccgctcgccgaagacttgctgttcggcaagcttgccaagggcggcgtt
gtaaaagtaggtgtcaagaatggcgagatcgatctcaaaatcgaaggaccggacaaaccg
cgtctagccggggacaaaccacctctgctgactgctgagtag
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