Roseobacter denitrificans: RD1_3595
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Entry
RD1_3595 CDS
T00376
Name
(GenBank) two-component hybrid sensor and regulator, putative
Organism
rde
Roseobacter denitrificans
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HATPase_c
Response_reg
HisKA
Otopetrin
HATPase_c_2
cREC_REC
DUF4381
Vpu
BRE1
FmiP_Thoc5
Motif
Other DBs
NCBI-ProteinID:
ABG33074
RoseoBase:
RD1_3595
UniProt:
Q162L9
LinkDB
All DBs
Position
complement(3458416..3461763)
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AA seq
1115 aa
AA seq
DB search
MATSYRATKEKRQYNRWVANETKEDFALRFTAHRARRWSYGRVANTAIGSISFLALEAIG
AALTLSYGFDIAVTAIMLVGAFLFITAFPISYYAARYGVDIDLLTRGAGFGYIGSTITSL
IYATFTFIFFALEAAILALALEYSLGIPLVLGYLISAVVVIPLVINGFSKISAFQAWTQP
IWVLLHMAPFVILGFVGYDLEAWSGFQGDAADTQEQSARLIMLGAAAGVIFSLIAQVGEQ
VDYLRFLPVPRTAAEKRRWWAALIIAGPGWSVLGMMKMLAGSYLAVIAIASGLPEAQATD
PTRMYETVFAMALDTPWVVILLTSSFVILSQLKINVTNAYAGSIAWSNFFSRLTHAHPGR
VVWLVFNVGIALMLMELGVFGALEATLTLYSHVALAWIGALVADLVINKPLGLSPPGIEF
RRAHLYDFNPVGIGAMITACVLSLSAFGGVFGPVAEALSSFIALGSSFLLTPVISLATRG
RYYIARPALTKVEATCIVCDYRFDPPDMTHCPFHEGPICSLCCTLDSNCRDACKPHGRLD
NATRRFLEDRFPAPVAQALMSRMSRFVISTTTIGAIIGLLLVFVRDQRDAVNFDAILWVV
FSMVLIVVGICVWMYLLISESQQQARSEAEKQSERLLFEVRAHERTDRKLQQAKEKAEAA
NTAKTRYMTGLSHELRTPLNSIYGFAQILERDEDIPIRRRNSITTIRRSSEHLAGLIEGL
LDISRIEAGRLKISRDRINLRVFLQQVSSIFKEAAREKNLTFTVDVSKFLPVWIVFDEKR
LRQIFINLLSNAIRYTDAGQVSLRITYRNEVAVIEVRDTGCGIMAADHKRIWDPFERGNN
TVAQGSGLGLTITKLLVEILGGEIEMESTPGLGSVFRVRLMLPSVPADGRDTMSSPAVET
QSLSVAGVVGPRRTLLVVDDDANHLNLVDSFLSPLGFAVLTATTAEQALTMLEDITPDLF
VLDIDLPGLDGYSLAEKLRKGDHRSSPIIMISGHAMDTRAPSTQVTLCDTFIAKPYNLDD
LLLRIAEILRVELVYKQKPASHSHESVALSDAERRELISLARNGMARALTDRIADLAERG
SLRGPMLVRLNKMASVFDLPGIAEILEEDVHDATD
NT seq
3348 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgtcatatcgcgcgaccaaggaaaaaaggcaatataatcggtgggttgccaat
gaaaccaaggaagacttcgccttgcgtttcaccgcccaccgcgcccggcggtggtcttat
ggccgggttgcaaatacagcgatcgggtcgatttctttccttgcactcgaagcgatcggc
gcagcactgaccctgtcttacgggttcgatattgcggtcaccgcgatcatgcttgtcggt
gcctttcttttcatcacggcctttcccatcagctattatgcagccaggtacggtgtggat
atcgacctgctgacacgcggtgcgggctttggttacatcggctcaacgatcacctcgctg
atctatgcgactttcacgtttatctttttcgcccttgaggcagcgatccttgcgctcgcg
cttgaatacagtttgggcatcccgctggtgttggggtatctcatcagcgcggttgtggtc
atcccactggtcatcaacggattttcaaagatctccgcctttcaggcatggacgcaaccg
atctgggtgctgttgcacatggcgcccttcgtgatcctcggctttgtcggttatgatctt
gaggcatggtccggctttcaaggcgatgccgccgacacgcaggaacaaagcgcgcgattg
atcatgttgggggctgctgcgggcgtgatcttctccctgatcgcgcaggttggtgagcag
gtagactacctgcggtttttgcccgtgccccgcaccgctgccgaaaaacggcgctggtgg
gcggcgctgatcatcgcaggtcccggctggtcggtcctcggcatgatgaagatgcttgcc
ggctcttatctggctgtgattgcgatcgccagcggcctgcctgaggcgcaggcaactgat
cccacgcgcatgtatgaaacggttttcgccatggcgctggacacgccgtgggtggttatc
ctgctcaccagcagctttgtcattctcagccagctaaagatcaacgtgaccaacgcctat
gcaggctcgattgcgtggtcgaatttcttttcccgactgacccatgcccatcccggtcgc
gtggtctggctggtgtttaacgtcggcattgcgctcatgcttatggaactcggcgtcttt
ggcgcgctggaggcgacgctgaccctgtactcccacgtggcactggcctggatcggcgcg
ctggttgcggatctggtgatcaacaagccgctcggcctcagcccgcccggtatcgaattc
cgtcgcgcgcatctctatgatttcaacccggttggcatcggcgcgatgattaccgcatgt
gtcctgtcgctttcggcatttggtggtgtgtttggcccggtggccgaggctctttccagc
tttatcgcccttggcagttcgttcctgctgacacctgtgatctcattggcgacgcgcggg
cgctattatattgcccgtccggccttaaccaaggtcgaggccacctgcatcgtctgcgac
tacaggtttgatccgccggacatgacccactgcccgtttcatgaaggccccatctgttcg
ctgtgctgcaccctggacagcaattgtcgcgacgcgtgcaagccgcacggcaggctcgac
aatgcgacgcgccggtttctggaggaccgcttccctgcacccgtcgcgcaggcgctgatg
tcgcgcatgtcccgtttcgtgatcagcaccacgacgataggggccattatcggtctgttg
ctggtgttcgttcgggatcagcgggatgcggtgaattttgatgccattctttgggttgtg
ttttcgatggtcctgattgtcgtgggcatctgcgtgtggatgtatctgttgatatccgaa
agccaacaacaggcgcgcagcgaagcggaaaagcaaagtgaacgcttgctgttcgaggtt
cgcgcgcatgaaagaaccgatcgcaagctacagcaggcaaaggaaaaagcggaggcggca
aacaccgccaagacccgttatatgaccggcctgagccatgaattgcgaaccccgctcaat
tcgatctacggctttgcgcagattctggagagggacgaggacattccgatccgtcgccgc
aattcgattacgacgatccggcgcagcagtgaacatctcgcagggttaatcgaggggctg
ctcgatatctcgcggatcgaagcgggccggctcaagatcagtcgggaccgcatcaacctt
cgggtttttctacagcaggtcagttcgatcttcaaagaagccgcacgcgagaaaaacctg
acgttcacggtagatgtcagcaagttcctgcccgtctggatcgtttttgacgagaaacgt
ctcaggcagattttcatcaaccttctgtccaacgccatccgctataccgatgccggccag
gtctcgcttcgcatcacatatcggaacgaagtcgcggtcatcgaggtccgtgacacgggg
tgcgggatcatggcggcagatcacaaacgcatctgggatcctttcgaacgcggtaacaac
accgtggctcaggggtctgggttgggcctgaccatcaccaaattgctggtggaaatcctt
ggtggcgagattgaaatggagagcacgcccggactgggaagtgttttccgggtgcgcctg
atgctgccgtcggtgcccgccgatgggcgcgatacgatgtcgtcgcccgccgtggaaacc
cagtcactatctgtcgcaggtgttgttggtccgcgccggacgcttctggtggtggatgat
gacgcaaaccatctcaaccttgtcgatagcttcctgtcccctcttggctttgcagtcttg
acggcgacaaccgcagaacaggccctcacaatgctggaagacatcacacccgatctcttt
gtgctggacatcgatttacccggattggacggctactcgcttgcggaaaaactacgcaag
ggcgatcacagatcatcacccatcatcatgatttcaggtcatgccatggatacccgtgcg
ccatcgacccaggtcaccctgtgcgatacgttcatcgcaaagccctataatcttgacgac
cttctgctcaggatcgctgaaatcctgcgggtggagcttgtctacaaacaaaaaccagcc
tcgcacagccacgaaagcgtggccttgtcggatgcagaacgccgcgaattgatcagcctg
gcgcgaaacgggatggcgcgcgccttgacggaccggatcgctgatcttgccgaacgggga
agcctgcggggtccgatgcttgtccggctgaacaagatggcatccgtttttgacttgccc
gggatcgccgaaatactggaggaagatgtgcatgacgcaacagattga
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