Roseobacter denitrificans: RD1_3722
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Entry
RD1_3722 CDS
T00376
Name
(GenBank) transcriptional regulator, LacI family, putative
KO
K06145
LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor
Organism
rde
Roseobacter denitrificans
Brite
KEGG Orthology (KO) [BR:
rde00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rde03000
]
RD1_3722
Transcription factors [BR:
rde03000
]
Prokaryotic type
Helix-turn-helix
LacI family
RD1_3722
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
LacI
Peripla_BP_4
Xre-like-HTH
AbiEi_4
HTH_Crp_2
TetR_N
DUF7342
MarR_2
HTH_23
HTH_3
GntR
HVO_A0261_N
HTH_AraC
HTH_24
Sigma70_r4
Sigma54_DBD
HTH_IclR
HTH_38
HTH_31
Motif
Other DBs
NCBI-ProteinID:
ABG33194
RoseoBase:
RD1_3722
UniProt:
Q161Z9
LinkDB
All DBs
Position
complement(3592970..3594010)
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AA seq
346 aa
AA seq
DB search
MPKSSKPRSPVTMRDVARAAGVSRMTVSRALRENSPISSETRERILQLVRDMNYVPDQMA
GSLTTKRSGFVAVLVPSLNNLHFAETVQALTEELEKIGQQILLGYTDYSVEREEKLVESM
MRRRPEAIVLSYDGHSDRTIQLLGEANVPVIELWERPDNPIGHTIGFSNCEAAAEMTHGL
IQRGYRNIAFLGEADDAWTRGAARRRGFSQAMQAAGLSAHRILQLGKPPLSIQDGAVATP
ELLRRYPDVDCIFCVSDVPAFGVLSALTGLNKSVPDDIGVAGFGNFEVSRFSNPSITTVI
VDPKRIGQATGTLLSDLFSEAYAANAAPRTVAVKAELSFRGSTKSG
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
ttgcccaaatcatcaaagccaagatcgcccgttacaatgcgggacgttgcgcgggccgca
ggcgtttcccgtatgacagtatcgcgcgcgttgcgcgaaaacagtcccatttcatctgaa
acacgtgagcgcattttgcaactcgtgcgcgatatgaactacgtgcctgatcaaatggcc
ggcagcctgaccacgaaaagatcgggatttgtggctgttctggtcccctcgctgaacaac
ctgcattttgccgagacagtgcaggctttgacggaagagctagaaaaaattggtcagcaa
atcctgctcggttacacggattattcagtcgaacgcgaggaaaagctcgttgaaagcatg
atgcggcgcaggccggaggcgatcgttttgtcctacgatggccactctgacagaaccatt
caattgctcggcgaggccaatgttcccgttatcgaactatgggaacgaccggacaatccc
atcgggcacactatagggttttccaactgcgaggcagcggccgaaatgacgcatgggctg
atccagcgtggatatcgcaacatcgcctttctgggtgaagcggatgacgcgtggacacgc
ggcgcggcgcggcggcgcggcttttcgcaggccatgcaagctgcgggcttgtctgcacac
cggatcctgcaactgggaaaaccgccgctctcgatccaggatggtgccgtggcaacgccg
gaactgctgcgtcggtatccggatgtggattgcatcttttgcgtctcggatgttccggcg
ttcggggttttgtccgcgctgaccgggttgaacaaatcggtgcctgatgacatcggcgtc
gcgggtttcggtaattttgaagtgtcgcggttttcaaacccatcaatcacgaccgtaatt
gtggacccaaaacgtatcggtcaggcgacagggacccttttgtccgacctgttttctgaa
gcgtatgccgcaaacgcggccccaaggacggtcgctgtgaaggccgagttgagctttcgc
ggcagtaccaaatccggctga
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