Roseobacter denitrificans: RD1_3739
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Entry
RD1_3739 CDS
T00376
Name
(GenBank) putative sugar ABC transporter, ATP-binding protein
KO
K10112
multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
Organism
rde
Roseobacter denitrificans
Pathway
rde02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
rde00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
RD1_3739
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rde02000
]
RD1_3739
Transporters [BR:
rde02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Maltose/maltodextrin transporter
RD1_3739
Maltose transporter
RD1_3739
Arabinogalactan oligomer/maltooligosaccharide transport system
RD1_3739
Raffinose/stachyose/melibiose transporter
RD1_3739
Alpha-glucoside transporter
RD1_3739
Glucose/mannose transporter
RD1_3739
Trehalose/maltose transporter
RD1_3739
Cellobiose transporter
RD1_3739
N,N'-Diacetylchitobiose transporter
RD1_3739
L-Arabinose/D-xylose transporter
RD1_3739
Fructooligosaccharide transporter
RD1_3739
Putative sorbitol/mannitol transporter
RD1_3739
Arabinooligosaccharide transporter
RD1_3739
Polygalacturonan/rhamnogalacturonan transporter
RD1_3739
Pectin-derived oligosaccharide transporter
RD1_3739
Putative multiple sugar transporter
RD1_3739
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
TOBE_2
AAA_21
SMC_N
OB_MalK
CysA_C_terminal
nSTAND1
AAA_29
TOBE
RsgA_GTPase
AAA_22
Mg_chelatase
nSTAND3
AAA_25
AAA
AAA_23
AAA_16
NB-ARC
ORC-CDC6-like
AAA_28
AAA_33
AAA_5
NACHT
Rad17
MIT_C
MMR_HSR1
RNA_helicase
ATPase_2
AAA_14
AAA_15
Motif
Other DBs
NCBI-ProteinID:
ABG33209
RoseoBase:
RD1_3739
UniProt:
Q161Y4
LinkDB
All DBs
Position
complement(3624192..3625229)
Genome browser
AA seq
345 aa
AA seq
DB search
MADVRIADIRKSYGSVEVIRDLNVDIADGEFVALVGPSGCGKSTLLRMIAGLEPINGGTI
SIGDRVVNNLPPAQRDIAMVFQTYALYPHKSVAENMGFALKVAKTDRAEIDRRVKEAAEI
LSLTDYLDRKPRHLSGGQRQRVAMGRAIVRDPQVFLFDEPLSNLDAKLRIQMRTEIKELH
QRLKTTTVFVTHDQIEAMTLSDRIVVMQGGVIEQLGTPLELYDNPANEFVATFIGAPSMN
LLSAELVGGQIRIGDHSFAGPSGSGKVNLGVRPEHLILSDDGLPMEVKVVEPTGSETMVF
LRYAGQDVTAVFRERHAFAPGSTIHLMPDPDRLHCFDAQTGQRMV
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atggctgacgtcaggatcgcggatattcgcaaatcatacgggtctgttgaggtcattcgt
gacctgaatgtcgatattgcggatggtgagtttgtagcactggttggtccgtcaggttgc
gggaaatcgacgcttttgcgcatgatcgcggggcttgagccaatcaacggcgggacgatt
tccatcggggaccgtgtggtgaataacctgccccccgcgcagcgcgacattgccatggtg
ttccagacctatgcgctttatccgcataaatccgtggccgagaacatgggctttgcgctc
aaggtcgccaagaccgaccgcgccgagattgaccgccgcgtcaaagaggcggcagagatc
ctcagcctcaccgattatctggaccgcaagccaaggcatctgtccggtgggcaacgtcag
agagtggcgatggggcgcgccatcgtgcgcgatccgcaggtgttcctgttcgatgaaccc
ttgtcgaaccttgacgccaaattgcgcatccagatgcgtacggaaatcaaggaactgcac
caacggctcaagacaaccactgtgtttgtcacccatgatcagatcgaggcgatgaccctt
tccgaccgtatcgttgtcatgcagggcggggtgatcgaacagctcggcaccccgcttgaa
ctttatgacaacccggccaatgaattcgtggcaacttttatcggtgcgccgtcgatgaac
ctgctgtctgccgaacttgtgggcgggcagattcgcatcggggatcattcgttcgcgggg
ccgtcggggtctggcaaggtcaaccttggggtgcggcccgaacatctgatcctgtcggat
gacggtctgcccatggaggtcaaagtggtcgagccgaccgggtcggaaaccatggtgttc
ttgcgctacgcaggtcaggacgtcacagcggtgtttcgtgaacgccacgcctttgcgccg
ggcagcaccattcacctgatgccagatccggaccggctgcattgtttcgatgcgcaaacc
ggccaacggatggtgtga
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