Roseobacter denitrificans: RD1_3841
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Entry
RD1_3841 CDS
T00376
Name
(GenBank) polysaccharide biosynthesis/export protein, putative
KO
K01991
polysaccharide biosynthesis/export protein
Organism
rde
Roseobacter denitrificans
Pathway
rde02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
rde00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
RD1_3841
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rde02000
]
RD1_3841
Transporters [BR:
rde02000
]
Other transporters
Pores ion channels [TC:
1
]
RD1_3841
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Poly_export
SLBB
SLBB_2
OEP
Muted
Motif
Other DBs
NCBI-ProteinID:
ABG33304
RoseoBase:
RD1_3841
UniProt:
Q161N9
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All DBs
Position
3712802..3714031
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AA seq
409 aa
AA seq
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MRKSLTEIIGRTARTFAVGLLCTLATAATAEPYRLAPGDRVLVQIIELNNHSYVGTVDTA
GQIRLPYLGTHLAANKTLDELSQDISLAVAGQQIRSVQNGISSVIVLDEQDIFLDIDTYR
PVTVVGAVAAPGRVPFEPGLNVRAAIGSAGGNALAGQTERVDQLANFRTRQAELRETEAW
LAAELWRIDVLLSGADSDTPIGEEYRIVEDRLDSRDVENFRRMIDGARAQLDREREDNAA
RIVLTKKRTEFLETALAQFQTASEIEEERLQDVLQLSNRGLTTVNSLDNAREGALNASSR
LLTTQADLAAAESELQSLMIEKQGLDADFVQALMDEKAKFERDYDEARARLTSLNRELAL
GTFTAEQDDSTELQYILHRQDGASETSTEVTPDTLLRPGDVVEVIFTYN
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atgcgtaagtcattgacagaaattattggtcgtacggcacgcacttttgcagttgggctg
ctgtgcacgctggcaaccgctgctacggcagagccctaccgtctggcaccgggtgatcgt
gtgctggtccagatcatcgaattgaacaaccactcttacgtcggcacggtggatacggca
ggtcaaatccgcctgccttatctgggcacgcatctggctgcgaacaaaacgctcgatgag
ttgtcgcaggatatttcgctggctgtcgcaggccagcaaatccgttcggtccagaacggc
atatcctcggtcatcgtgctggatgaacaggacattttccttgatatcgacacctatcgc
cccgtcaccgtggtcggcgctgtcgccgcaccgggccgcgtcccctttgagccggggctc
aatgtgcgggccgccatcggctcggctggcgggaacgcgctggcggggcaaacggaacgc
gttgatcaactggccaactttcgcacccggcaggccgagttgcgcgagaccgaagcatgg
cttgcggcggagctttggcgcatcgacgttctgctgtccggcgcggacagcgatacaccg
attggtgaagagtaccggatcgtcgaagatcgcctcgacagccgcgatgtcgagaatttc
agacgcatgatcgacggcgcgcgcgcgcaattggaccgggaacgcgaagacaatgcagcg
cggatcgttctgaccaagaagcgcacggagtttcttgaaaccgcgctggcgcagtttcaa
acagcatcagagatcgaggaagaaagactgcaggatgttctgcagctgtcaaaccggggg
ctgaccacggtcaactctctcgacaatgcccgcgagggggcgcttaacgcgtcgtcgcgt
ttgctgacgacgcaagccgatctggccgccgcagagagcgaattgcagtcgctgatgatc
gaaaaacaggggctggacgcagacttcgttcaggcgttgatggatgagaaagccaagttc
gagcgtgactatgacgaagcgcgggcgcgtctgaccagcctcaaccgtgaactggcgctt
ggcaccttcaccgccgaacaggacgactccacggaactgcaatacatcctgcatcgtcaa
gacggcgcaagcgagacgagcacggaagtcacgccagacacgctgttgcgtccgggcgac
gttgtggaagtgatctttacctacaactga
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