Roseobacter denitrificans: RD1_3883
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Entry
RD1_3883 CDS
T00376
Name
(GenBank) ABC transporter, periplasmic substrate-binding protein, putative
KO
K02027
multiple sugar transport system substrate-binding protein
Organism
rde
Roseobacter denitrificans
Brite
KEGG Orthology (KO) [BR:
rde00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rde02000
]
RD1_3883
Transporters [BR:
rde02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Putative multiple sugar transporter
RD1_3883
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_1
COMMD8_HN
Motif
Other DBs
NCBI-ProteinID:
ABG33344
RoseoBase:
RD1_3883
UniProt:
Q161J9
LinkDB
All DBs
Position
complement(3752490..3753950)
Genome browser
AA seq
486 aa
AA seq
DB search
MRTLMGGLLGATTLAAGLSGAPALAEDITITMAAPDWPPTRFMQEYADQTYTSPSGANVK
LEIDFIPWPSFYERVAASLTSGEQKYQMIVTDSQWLGAFVEGGYYLNLTDRIKADPELTA
IMQDLHPALVSAYSTYPHRTRAQLEEAGEVPAPGVNYYGFPQFPDTYVTYYREDIFCHEG
EMADFEAKYGTNLPCTYEDWQDTDWTKWGQIGEFFQRKKGDMLAGETLDDDFYGIAYQAG
KGYDFSTMQINAFIWQQGGDIWDETKAPEAQAEGVVNSDVAVAAFEEYLSYLQYMPPVAQ
TGQMDIFVIQDLYMQGKVGAIIDWVGLGEPILDPDASKVHDKSAFAPAPGTRQADGSIDR
TGNIGGQPFVLTTWNSDEIVDEALNIVKWWLSPETQLEAVKNGGQSGRMSVMADPQYNDL
RPWNRAHVEMIDWQKDVWHIPEFFEMLTQQQEEFDKAITGQISAKEALDAVAEFQQELLE
DIGMIE
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgcgtactttaatgggcggattactgggggcgacgaccctggccgcaggattgagcgga
gccccggctctcgccgaagacatcaccatcaccatggcagctccggactggccaccgaca
aggttcatgcaggaatatgcggatcagacctatacgtcgccgtcgggtgccaatgtgaag
ctggagatcgacttcatcccgtggcccagtttttacgagcgggtggcagcatcgctgacg
tcgggtgagcagaaataccagatgatcgtgaccgacagccagtggcttggtgctttcgtc
gagggtggatattacttgaacctgacggaccggatcaaagcggacccggaattgacggcc
atcatgcaggatctgcacccggcgcttgtctctgcctattcgacctatccgcacagaacc
cgtgcgcaactggaagaggcgggtgaagtaccggcaccgggcgtcaattactacggcttc
ccgcagttccccgatacctatgtgacctactatcgcgaagatattttctgtcacgaaggg
gaaatggcggattttgaggccaagtacggcacaaatctgccctgcacctatgaggactgg
caggatacggactggaccaaatggggacagatcggtgaattcttccagcgcaagaaaggc
gatatgctcgccggggaaacgctggacgacgatttctacggcatcgcctatcaggctggc
aagggatatgatttctccaccatgcagatcaacgcgtttatctggcagcagggtggcgat
atctgggacgaaaccaaagctcccgaagcgcaggccgaaggtgtcgtgaactcggatgtc
gcggtcgctgccttcgaagaatacctgtcctatctgcagtacatgccgccggtagcgcag
accgggcagatggacatcttcgtgatccaggatctgtacatgcagggcaaggttggtgcg
atcatcgactgggttggccttggtgagcccattctcgaccctgacgcctcaaaggtgcat
gacaaatccgcctttgcaccggcaccgggcactcgtcaggctgatggctcgatcgaccgg
accggcaacatcggcggtcagccgttcgtcctgacaacatggaacagcgatgagatcgtc
gatgaggcgctcaacattgtgaagtggtggctgagcccggaaacacagctggaagcggtc
aagaacggtggtcaatccgggcgcatgagcgtcatggcggatccacagtacaacgatctg
cgcccatggaaccgtgcgcatgtggagatgatcgactggcagaaagacgtctggcacatc
cctgagttcttcgaaatgctgactcagcagcaggaagaattcgacaaggcgatcaccggt
cagatttcggccaaggaagcgctcgatgcggttgctgaattccagcaggaattgctggaa
gacatcggcatgatcgagtga
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