Roseobacter denitrificans: RD1_3900
Help
Entry
RD1_3900 CDS
T00376
Symbol
pth
Name
(GenBank) peptidyl-tRNA hydrolase
KO
K01056
peptidyl-tRNA hydrolase, PTH1 family [EC:
3.1.1.29
]
Organism
rde
Roseobacter denitrificans
Brite
KEGG Orthology (KO) [BR:
rde00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
rde03012
]
RD1_3900 (pth)
Enzymes [BR:
rde01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.1 Carboxylic-ester hydrolases
3.1.1.29 peptidyl-tRNA hydrolase
RD1_3900 (pth)
Translation factors [BR:
rde03012
]
Eukaryotic type
Release factors
RD1_3900 (pth)
Prokaryotic type
RD1_3900 (pth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pept_tRNA_hydro
Motif
Other DBs
NCBI-ProteinID:
ABG33359
RoseoBase:
RD1_3900
UniProt:
Q161I4
LinkDB
All DBs
Position
3767598..3768299
Genome browser
AA seq
233 aa
AA seq
DB search
MKLIVGLGNPGPKYAGHRHNIGFMALDRIAADHGFGAWKDKHQGSLSEGRFGSDRAVLLK
PLTFMNNSGQSVQAAMRFYKLEPEDVIVLHDEIDLAPGKVKYKTGGGHAGHNGLRSIHAH
IGPEYARVRLGVGHPGHKDRVPGYVLHDFAKADQDWLDDVLRGVSDGAPFLATTEAAKFS
NAVALRVSPRRSGTGQKGKDKPPAPAKQQATATKAEPEPDTRSALQKLMERFK
NT seq
702 nt
NT seq
+upstream
nt +downstream
nt
gtgaaactgatcgttgggttgggcaatccgggcccgaaatacgccggtcacaggcataat
atcggcttcatggcgctggaccgtatcgccgcggatcacggctttggcgcgtggaaagac
aagcaccagggcagtctcagcgaggggcgttttggcagtgaccgtgcggtcttgctgaaa
ccgctaaccttcatgaacaactcgggtcaatcggttcaggcggcgatgcgcttttacaaa
cttgaaccggaggatgtgattgtcctgcatgatgagatcgacctcgcaccgggcaaagtg
aaatacaagaccggcggcgggcatgcaggtcacaatgggctacgctcgatccatgcgcat
atcgggcctgaatacgcgcgcgtcaggctgggggttggccatccggggcacaaggaccgc
gtacccggctatgtattgcacgattttgccaaagcggatcaggattggctggatgatgtg
ttgcgcggtgtcagcgacggtgcgccctttcttgccaccactgaggctgcaaaattcagc
aacgcggttgcgctgcgcgtgtcgccccgccgttccggcaccgggcaaaagggcaaggac
aaaccacccgcgcccgcaaaacaacaggcgacggcgaccaaggcagaacccgaacccgac
acgcgttctgcactgcaaaagctgatggaacgcttcaagtga
DBGET
integrated database retrieval system
