Roseobacter denitrificans: RD1_3921
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Entry
RD1_3921 CDS
T00376
Symbol
miaB
Name
(GenBank) tRNA-i(6)A37 thiotransferase enzyme MiaB, putative
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
rde
Roseobacter denitrificans
Brite
KEGG Orthology (KO) [BR:
rde00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rde03016
]
RD1_3921 (miaB)
Enzymes [BR:
rde01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
RD1_3921 (miaB)
Transfer RNA biogenesis [BR:
rde03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
RD1_3921 (miaB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
B12-binding
Motif
Other DBs
NCBI-ProteinID:
ABG33378
RoseoBase:
RD1_3921
UniProt:
Q161G5
LinkDB
All DBs
Position
complement(3785952..3787277)
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AA seq
441 aa
AA seq
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MTAPKKLFIKTYGCQMNVYDSERMSEALVAEGYVETKTAEDADMILLNTCHIREKAAEKV
YSELGRLKSLKADNPDLKLGVAGCVAQAEGEEIMRRQPAVDLVVGPQSYHRLPQMEARLR
EGHKALDTDFPPEDKFEELKARPKARRAPSAFLTVQEGCDKFCAFCVVPYTRGAEVSRPV
TRVLDEARDLVERGVREITLLGQNVNAYHGAGADGNEKTLAQLIWALNDIDGLERIRFTT
SHPNDMQDDLIEAHRDCPKLMPYLHLPVQSGSDRILKRMNRKHTADSYLRLIERIRVGRP
DILLSGDFIVGFPEETEADFQATLDLIEAVNYGYAYSFKYSTRPGTPAAERAQVDPVEAD
ERLQRIQALITRQQQDIQQSMVGRDVSVLIEKPGRFEGQMVGKSEYLHAVHVDQCSAQIG
DILPVRIVEAKRNSLAAVTLA
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgacagcgcccaagaagcttttcattaagacatacggctgccagatgaatgtctatgac
agcgaacgcatgtccgaggctctggtcgcggaagggtatgttgagacgaaaaccgcagaa
gacgcggatatgatcctgctcaacacctgccacatccgcgaaaaggcggcggaaaaggtt
tactccgaactaggccgtctaaaatcgctcaaggccgataaccctgatctgaagcttggc
gtcgcgggatgcgtcgcacaggccgaaggggaagagatcatgcgccgccagccggcggtg
gatctggttgtggggccgcagtcctaccaccgcttgccacagatggaagcgcgcctgcgc
gagggccacaaggcgctcgacaccgactttccacccgaggacaaattcgaagagctcaag
gcgcgccccaaagcgcggcgcgccccgtcagcgtttttgaccgtgcaggaaggctgcgac
aaattctgcgccttttgtgtggtgccttacacgcggggtgctgaggtcagccgccctgtc
acgcgcgtgctggacgaggcccgcgatctggtggagcgtggcgtgcgcgaaatcaccctg
ctggggcagaatgtaaacgcctatcacggcgcgggtgcggacggtaacgaaaagacgctg
gcgcaattgatctgggcgctcaatgacatcgacgggttggaacgcatccgctttaccacc
tcgcaccccaacgacatgcaggatgatctgatcgaggcgcaccgcgattgcccgaaactg
atgccctatctgcatctgccggtgcaatcggggtctgatcggatcctcaagcgcatgaac
cgcaagcacacggccgacagctatctgcgcctgatcgaacgtattcgcgtcggacggcct
gatatcctgctctccggggattttatcgtcggctttcccgaagaaacagaagcggatttt
caagccacgctcgatctgatcgaggcggtaaattacggctatgcctattcgttcaaatat
tccacacggcccggcacgcccgccgcggagcgcgcgcaggtcgaccccgtcgaagcggat
gagcggttgcagcgcatacaagcgctgatcacgcgccagcagcaggatatccagcagtcc
atggtcgggcgtgacgtcagcgttctgattgaaaagccgggccgtttcgagggtcagatg
gtgggaaaatccgaatatctgcacgcggtccatgtggatcaatgcagcgcgcagatcggc
gacattttacccgtgcgcattgtcgaggcgaaacgcaactcgcttgccgcggtgacgctt
gcctga
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