Roseobacter denitrificans: RD1_3936
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Entry
RD1_3936 CDS
T00376
Symbol
tetA
Name
(GenBank) tetracycline resistance protein
KO
K08151
MFS transporter, DHA1 family, tetracycline resistance protein
Organism
rde
Roseobacter denitrificans
Brite
KEGG Orthology (KO) [BR:
rde00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rde02000
]
RD1_3936 (tetA)
01504 Antimicrobial resistance genes [BR:
rde01504
]
RD1_3936 (tetA)
Transporters [BR:
rde02000
]
Major facilitator superfamily (MFS)
Drug transporters
Drug:H+ antiporter-1 (12 spanner) (DHA1) family [TC:
2.A.1.2
]
RD1_3936 (tetA)
Antimicrobial resistance genes [BR:
rde01504
]
Gene variants
Tetracycline resistance genes
Transporters
RD1_3936 (tetA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MFS_1
Sugar_tr
MFS_4
TRI12
ATG22
Motif
Other DBs
NCBI-ProteinID:
ABG33392
RoseoBase:
RD1_3936
UniProt:
Q161F1
LinkDB
All DBs
Position
3797388..3798593
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AA seq
401 aa
AA seq
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MKPAVVFILMTMMIDAMGIGLIIPVMPDLFQEVGAGDLGTAALWGGILATAFAVMQFFFG
PVIGGLSDRFGRRPILLVSLFVMMLDYLVMALAGSIWLLLIGRMIGGVTAATQATANAYM
ADISAPQDRAANFGLIGAAFGVGFVLGPLIGGLLAEFGTRAPFYAAAACAGLNAIFGYFV
LKETLPASKRRPFEWRRANPFGSFRHLSKLHALGPFLIVFFLYQVAFAVYPAIWSFFGKE
RFGWEPATIGLSLALFGIMMAIVQGGLIRPVMRLLGARGTVVYGHIFDICVFLALAFVTS
GTIALILTPLAALAAVITPALQGIMSKSVGPDAQGELQGALTSLSALAMILSPLVMTGTF
AAFTGPDAPIYAPGAPFILSAGLIVIGLTIFITRGRAASFS
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
gtgaaacccgccgtcgttttcatcctgatgaccatgatgattgatgcgatgggcatcggg
ctgatcatccccgtcatgcccgacctgttccaggaggtgggcgcgggcgatctgggcacc
gcagcgctctggggcgggatattggccacggcatttgcggtcatgcagttcttctttggg
cccgtgatcggcggtctgtcagatcgctttgggcgcaggccaatcctgctggtatcactg
tttgtgatgatgctggattacctcgtcatggcgctggcaggcagcatctggctgttgctg
atcgggcgcatgatcggcggggtcacggctgcgacacaggcaacggccaatgcctatatg
gcggacatttcggccccgcaggaccgggccgcgaacttcggcctgatcggtgcggctttc
ggtgtcggcttcgtgcttggccccctgattggcggcctgctggctgaattcggaacccgc
gccccgttttatgccgctgccgcctgcgccgggttgaatgcgatcttcggctatttcgtg
ctcaaggaaacgctgcccgccagcaaacggcgccctttcgagtggcggcgcgccaaccct
ttcggcagttttcgccacctcagcaaactgcatgcgctggggccgttcctgatcgtattt
tttctctatcaggtggcattcgccgtttaccccgccatctggtccttctttggcaaggaa
cggttcggttgggaacctgcgaccatcgggctgagccttgcgctgttcggcatcatgatg
gccatcgtgcagggcggtctgatccgccccgtgatgcgtctgctgggcgcgcgtggcacg
gtcgtttatggccatatttttgacatctgtgtatttctggccctcgcctttgtcaccagt
ggcaccatcgccctgatcctgacaccgctcgcagccctcgccgctgtgatcaccccagcc
ctgcaaggcatcatgtccaaatccgtcggacccgacgcgcagggcgagttgcaaggcgcg
ctcacctcgctcagcgcacttgcgatgatcctgtcaccactggtcatgacgggcactttc
gcagccttcaccggcccggatgcgcccatttacgcgccgggcgcgcctttcatcctgtcg
gctggattgatcgtcatcggtctgaccattttcatcacacgcgggcgcgccgcatcgttt
tcctga
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