Roseobacter denitrificans: RD1_3953
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Entry
RD1_3953 CDS
T00376
Name
(GenBank) sugar ABC transporter, substrate-binding domain, putative
KO
K02027
multiple sugar transport system substrate-binding protein
Organism
rde
Roseobacter denitrificans
Brite
KEGG Orthology (KO) [BR:
rde00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rde02000
]
RD1_3953
Transporters [BR:
rde02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Putative multiple sugar transporter
RD1_3953
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_1
ChrB_N
TetR_C_14
Motif
Other DBs
NCBI-ProteinID:
ABG33407
RoseoBase:
RD1_3953
UniProt:
Q161D6
LinkDB
All DBs
Position
complement(3812108..3813328)
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AA seq
406 aa
AA seq
DB search
MFLKRIVLAGAVSLMGSAAVAACSFENDVPIKSLSAGFEAWKAVTDAMAECGNFQAELDQ
EFRTKQPAAFEANPALYQIGGVSNGTITPLLNSGTIRPLDDLVEKYGQNLSPNQLIRVNG
QIMAIAMMVNTQHLMYRADILADLGIETPTSWDEVYAAAEKIKAAGVVDYPLGATMKSGW
NLAQEFVNMYPGFGGVFFNDDNSAAVNSEAGMKALATMKRALEYTDPEVLVSDSTYVQQQ
FQQGKIAMANLWASRAGAMNDEAESQVVGKVAMAAAPVAMQGGAPATTLWWDGIVIARNI
SDEEADAAFRVAMEGLDAETVQGANDAAIWLIPGYEPTEIAAGAIATATANPAPPAYPST
TQMGLLHTALGNELPAFLTGELDAQATLEAIEEAYTISAREANVLE
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atgtttctgaagagaattgttctggcgggtgccgtctcgttgatgggaagcgctgcggtc
gcagcctgctcgttcgagaacgacgtgccgatcaagtcgctgagtgcgggttttgaagca
tggaaagccgtcacggacgcgatggccgagtgtgggaattttcaggcggaactggatcag
gaattccgcacgaaacagcccgccgcatttgaggcaaacccggcgctctaccagatcggc
ggcgtgtccaacgggacaatcacgccgcttttgaattcgggcacgatccgcccgctggac
gatctggttgaaaaatatggtcagaacctcagcccgaaccaattgatccgcgtgaacggt
cagatcatggcgatcgcgatgatggtgaacacgcagcaccttatgtaccgcgcggatatt
ctggccgaccttggcatcgaaacgcccacatcatgggatgaggtttacgctgcagccgaa
aagatcaaggccgcaggcgtcgttgactaccccctgggggcaacaatgaaatcgggctgg
aacctcgcgcaggaattcgtgaacatgtatcccggtttcggcggcgttttctttaacgac
gacaactccgccgcggtcaattccgaagccgggatgaaagcgcttgcgaccatgaagcgc
gcgcttgagtataccgaccccgaagtcctcgtcagcgacagcacctatgtgcagcagcaa
ttccagcagggcaagattgccatggcaaacctctgggcaagccgcgccggtgccatgaat
gatgaagcggaaagccaggtcgtgggcaaggtggccatggccgccgcacccgttgccatg
caaggcggtgcaccggccacgacgctgtggtgggacgggattgtcatcgccaggaacatc
tctgacgaggaggcggatgcagccttccgcgttgcgatggagggtctggatgccgaaacg
gtgcagggtgcgaatgatgcagccatctggctgatcccgggctatgagccgaccgagatc
gccgcaggtgccattgcgacggctacggcaaatcccgcaccgcccgcatatccatcaacc
acgcagatgggcctgttgcacaccgctctgggcaatgagctgcctgcgtttctgaccggc
gagcttgatgcgcaggcgacccttgaagccatcgaggaagcctacacgatctcggcccga
gaagcgaacgtactcgaatga
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