Roseobacter denitrificans: RD1_3962
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Entry
RD1_3962 CDS
T00376
Symbol
dinF
Name
(GenBank) DNA-damage-inducible protein, putative
KO
K26937
MATE family, multidrug efflux pump
Organism
rde
Roseobacter denitrificans
Brite
KEGG Orthology (KO) [BR:
rde00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rde02000
]
RD1_3962 (dinF)
Transporters [BR:
rde02000
]
Solute carrier family (SLC)
SLC47: Multidrug and Toxin Extrusion (MATE) family
RD1_3962 (dinF)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
MatE
Motif
Other DBs
NCBI-ProteinID:
ABG33416
RoseoBase:
RD1_3962
UniProt:
Q161C7
LinkDB
All DBs
Position
complement(3821086..3822426)
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AA seq
446 aa
AA seq
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MTADPAAALREEISHRRVLKIALPIVLSNATVPILGAVDVGVVGQMGEAAPIGAVALGAV
ILSTMYWIFGFLRMGTVGLVGQAEGAGDRAEVSAWLTRALVVALVGGFLMIVMQPLIFWS
AFRLAPASDEVEGLARQYLAIRIWTAPAAIAVFALTGWLVAMEKTAGVFWVQLVMNGVNI
VLDLVFVLVLDWGVPGVAAATVIAEITGCALALWFCRAAFQRPDWRDWPRIFDRAKLIRM
ALLNTDIFLRSLMLMIIFSSFVFIGARFGDVTLAANQVLIQFMYITVYAMDGFAFTAESL
IARAYGLGKRSHVRRSVIVTSFWGLVVCVTSALAFALAGGWIIDVMAKDPDVQQAARAFL
PYMVAAPVVGCAAWMLDGIFIGATRGRDMRNMMALSFASYWLAILVLLPIWGNHGLWVAL
LISFAVRGITLGARYPALERHASKAG
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
gtgacagctgaccctgccgccgccctgcgcgaagaaatcagccacagacgggttctgaaa
atcgccctgccgattgtgctgtccaatgccacggttcccattctgggcgcggtggacgtg
ggcgttgtcgggcagatgggcgaggcggccccgatcggggctgtggcactgggggcggtt
atcctgtcgaccatgtactggatattcgggttcttgcggatgggcacggtcggtctggtg
gggcaggccgagggcgcgggcgatcgggccgaagtttctgcatggctgacccgcgcgctg
gtcgtggcgcttgtgggtggttttctgatgatcgtgatgcagccgctgatcttctggagt
gccttccggctcgcccctgccagtgacgaggtggagggccttgcgcggcaatatcttgcg
atccgcatctggacagcgccggcagcgattgcggttttcgccctgaccggctggctggtc
gccatggaaaagacggcgggcgtgttttgggttcagttggtgatgaacggcgtgaacatc
gtgctggatctggtattcgtgctggtgcttgactggggcgttccgggggtggctgcggcg
accgtcattgccgaaatcaccggttgcgcccttgcgctctggttttgccgtgcggccttt
cagcgtccggactggcgcgactggccccgcatattcgaccgcgccaaactgatccgcatg
gcgcttttgaacacggatatcttcctgcgctcgctgatgctgatgatcatcttttcatcc
tttgtcttcatcggtgcgcgtttcggggatgtaacgctggccgccaatcaggtgctcatt
cagttcatgtatatcacggtctatgcgatggatggctttgcctttacggccgagagcctg
atcgcgcgtgcctacggtcttggcaagcgcagccatgtgcggcgcagcgtgatcgtcacg
tccttctggggacttgtggtctgtgtcaccagcgccctggcttttgcgctggcggggggc
tggatcattgatgtgatggccaaagaccccgacgtgcagcaagcggcgcgcgcgttcctc
ccctatatggtggccgcgcccgttgtagggtgtgcggcgtggatgctggatggtatcttt
atcggggccacgcgcgggcgcgacatgcgcaatatgatggccttgagtttcgcgtcgtat
tggctggcgatactggtgctcttgccgatctggggcaatcacgggctgtgggtggctttg
ctgatctcttttgccgtgcgtggcattacgttgggcgcgcggtacccggcccttgaacgc
cacgcgagcaaggcaggttag
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