Roseobacter denitrificans: RD1_3972
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Entry
RD1_3972 CDS
T00376
Symbol
fadA
Name
(GenBank) fatty acid oxidation complex beta subunit
KO
K00626
acetyl-CoA C-acetyltransferase [EC:
2.3.1.9
]
Organism
rde
Roseobacter denitrificans
Pathway
rde00071
Fatty acid degradation
rde00280
Valine, leucine and isoleucine degradation
rde00310
Lysine degradation
rde00362
Benzoate degradation
rde00380
Tryptophan metabolism
rde00620
Pyruvate metabolism
rde00630
Glyoxylate and dicarboxylate metabolism
rde00650
Butanoate metabolism
rde00720
Other carbon fixation pathways
rde00900
Terpenoid backbone biosynthesis
rde01100
Metabolic pathways
rde01110
Biosynthesis of secondary metabolites
rde01120
Microbial metabolism in diverse environments
rde01200
Carbon metabolism
rde01212
Fatty acid metabolism
rde02020
Two-component system
Module
rde_M00373
Ethylmalonyl pathway
Brite
KEGG Orthology (KO) [BR:
rde00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00620 Pyruvate metabolism
RD1_3972 (fadA)
00630 Glyoxylate and dicarboxylate metabolism
RD1_3972 (fadA)
00650 Butanoate metabolism
RD1_3972 (fadA)
09102 Energy metabolism
00720 Other carbon fixation pathways
RD1_3972 (fadA)
09103 Lipid metabolism
00071 Fatty acid degradation
RD1_3972 (fadA)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
RD1_3972 (fadA)
00310 Lysine degradation
RD1_3972 (fadA)
00380 Tryptophan metabolism
RD1_3972 (fadA)
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
RD1_3972 (fadA)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
RD1_3972 (fadA)
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
RD1_3972 (fadA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rde04147
]
RD1_3972 (fadA)
Enzymes [BR:
rde01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.9 acetyl-CoA C-acetyltransferase
RD1_3972 (fadA)
Exosome [BR:
rde04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
RD1_3972 (fadA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Thiolase_N
Thiolase_C
ketoacyl-synt
Thiolase_C_1
Motif
Other DBs
NCBI-ProteinID:
ABG33426
RoseoBase:
RD1_3972
UniProt:
Q161B7
LinkDB
All DBs
Position
3829356..3830567
Genome browser
AA seq
403 aa
AA seq
DB search
MTDAYIYDALRTPRGKGRKDGSLHEVTSLRLSALTLNALKDRNNLEGHAVEDVIWGNVTQ
VMEQGGCLARSAVLASDLDERIPGLAINRFCASGMEAVNLAANQVRGGAGQAYIAGGVEM
MGRVAMGSDGAAIAVDPTLAMEKHFVPQGISADIIATEYGFSRDDADTLAVESQRRAKQA
WDEGRFDKSVIEVRDQNGLKILDHDEYMRPQTDMQSLGALNPAFQAMGEVMPGFDKVALM
KYPHLERINHIHHAGNSSGIVDGAAAVLIGNKEFGEEHGLKPRARIRATAKIGTDPTIML
TGPVPVTEKILADSGMDIKDIDLFEVNEAFAAVVLRFLQAFDVDDAKVNVNGGSIAMGHP
LGATGAIIIGTLLDELERDDKEVGLATLCIASGMGAATIIERV
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacgcctatatctatgacgcgctgcgcaccccgcgtggcaagggccgcaaggac
ggcagcctgcacgaggtgacatccctgcgcctgtccgcgctgacgctgaacgcgctgaag
gaccgcaacaaccttgagggccacgctgttgaggatgtgatctggggaaatgtgacacag
gtgatggaacagggcggctgccttgcgcgctctgccgtgttggcgtccgatctggatgaa
cgcatccccggtctggcgattaaccgcttttgcgcctctggcatggaggcggtcaacctc
gccgccaatcaggtgcgcggtggtgccggtcaggcctacatcgcgggcggggtcgagatg
atgggccgtgtggccatgggcagtgacggggcggccatcgcggttgatccgacgctcgca
atggaaaaacacttcgtcccccaaggcatcagcgcggatatcatcgcgaccgaatatggc
tttagccgcgatgatgcggacacgctggcggtcgaatcccagcgtcgcgcaaaacaggca
tgggatgaggggcgttttgacaaatcggtcatcgaggtgcgcgaccagaacgggctgaag
attctggatcacgacgaatacatgcgcccgcaaaccgacatgcaaagccttggcgcgctg
aaccccgcctttcaggcgatgggagaggtcatgcccggcttcgacaaggtcgcgctgatg
aaatacccgcatcttgagcggatcaaccatatccaccacgcgggcaactcatcgggtatc
gtcgatggggcggcagccgttctgatcggcaacaaagagttcggcgaagagcacggactg
aagccgcgcgcccgcatccgcgccacggcgaaaatcggcaccgaccccacgatcatgctg
accggtcctgtgccggtgaccgaaaaaatcctcgccgacagtgggatggacatcaaggac
attgatctttttgaggtgaacgaggcctttgccgccgtggtgctgcggtttttgcaggcg
tttgatgtcgatgatgcgaaggtgaacgtcaacggcggctcgatcgccatgggccatccg
cttggcgcgaccggggccatcatcatcggcacgctgctggatgagttggagcgcgacgac
aaagaggtcggtctggctacgctctgcatcgcctccggcatgggtgccgcgaccatcatc
gagcgcgtttaa
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