Roseobacter denitrificans: RD1_3978
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Entry
RD1_3978 CDS
T00376
Symbol
deoB
Name
(GenBank) phosphopentomutase
KO
K01839
phosphopentomutase [EC:
5.4.2.7
]
Organism
rde
Roseobacter denitrificans
Pathway
rde00030
Pentose phosphate pathway
rde00230
Purine metabolism
rde01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rde00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00030 Pentose phosphate pathway
RD1_3978 (deoB)
09104 Nucleotide metabolism
00230 Purine metabolism
RD1_3978 (deoB)
Enzymes [BR:
rde01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.2 Phosphotransferases (phosphomutases)
5.4.2.7 phosphopentomutase
RD1_3978 (deoB)
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GFIT
Motif
Pfam:
Metalloenzyme
Sulfatase
Phosphodiest
Motif
Other DBs
NCBI-ProteinID:
ABG33431
RoseoBase:
RD1_3978
UniProt:
Q161B2
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Position
complement(3836449..3837672)
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AA seq
407 aa
AA seq
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MARAFLVVMDSVGIGGAPDAAAYFNGGIPDTGANTVGNIAQHCARGLASIGREGPLKVPN
LDRLGLGRAVHLASGALAPGLGREPAGVWGAATETSTGKDTPSGHWELAGLPVPWAWHHF
TQTTDSFPPEVIQRVCDLAQTDGILGNCHAPGTEIVAKFGQEHMRTGKPICYTSADSVFQ
IAAHEDSFGLQRLLDLCADLAPFLHRMKVGRVIARPFTGSAGIGFQRTGNRRDFAIAPPG
PVLTNWVQDAGRRIYAVGKIGDIFSMQGIDKVFKGSDRELMLHLQSLLATAEEGSLTFAN
FVEFDSLYGHRRDVSGYASALEWFDVCLGRLLARLLPSDMLIITADHGNDPTWHGTDHTR
ERVPVLIAGKGVGQLGHIGFRDVAALVAQHLDVPVPEMLYTQADPKQ
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgtgcctttctggtcgtcatggattccgtcggcatcgggggcgcgcccgatgcg
gcggcctatttcaacggcggcattcccgacaccggcgccaataccgtcggcaatatcgcg
cagcactgtgcgcgcggacttgcgtcgatcgggcgtgaggggccactaaaagtgcccaat
ctcgacaggctgggccttggtcgcgcggtacatctggccagcggcgcgctggccccgggg
ttggggcgcgaacccgctggggtctggggcgcggcgaccgaaacatccaccggtaaggat
acgccatccgggcattgggaactggcgggcctgccggtcccctgggcgtggcatcatttt
acgcaaaccacagactcctttccacccgaagtgatccagcgggtgtgtgatcttgcccag
acggacggtatcctcggcaactgccacgcgccgggaaccgagatcgtggccaagttcggg
caagagcatatgcgcacaggcaagcccatttgctatacttccgcggactcggtttttcag
attgcggcgcatgaggacagtttcggactgcaacgcctgctcgatctgtgcgcggatctt
gcgccgtttttgcaccgcatgaaagtgggccgtgtcatcgcgcggccctttacgggatcg
gcgggcatcggattccaacgcacgggaaaccgccgcgatttcgcgattgcgccgccgggc
cctgtgctgaccaattgggtgcaggacgcgggccgtcgtatctatgccgtgggcaagatc
ggcgatattttctccatgcagggcattgacaaggttttcaaaggcagtgaccgggaattg
atgctgcatctgcaatcgctgctggccacagccgaagaaggcagcctgacattcgccaat
ttcgtcgaattcgacagcctttacgggcaccgtcgcgatgtgtcgggctatgcctcggcg
ctggaatggttcgatgtctgtctggggcggttgctggcccgattgctgccaagtgatatg
ctgatcatcacggcggaccatggcaatgaccccacatggcacggcacggatcacacgcgc
gaacgcgtgccggtgctgattgccgggaaaggggtggggcagctgggccacatcgggttc
agggatgtggccgcactggtcgcacagcaccttgatgtgcctgtgcccgagatgctttat
acgcaggctgacccaaagcaatga
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