Roseobacter denitrificans: RD1_3979
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Entry
RD1_3979 CDS
T00376
Symbol
deoA
Name
(GenBank) thymidine phosphorylase
KO
K00758
thymidine phosphorylase [EC:
2.4.2.4
]
Organism
rde
Roseobacter denitrificans
Pathway
rde00240
Pyrimidine metabolism
rde01100
Metabolic pathways
rde01232
Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:
rde00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
RD1_3979 (deoA)
Enzymes [BR:
rde01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.4 thymidine phosphorylase
RD1_3979 (deoA)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Glycos_transf_3
PYNP_C
Glycos_trans_3N
Motif
Other DBs
NCBI-ProteinID:
ABG33432
RoseoBase:
RD1_3979
UniProt:
Q161B1
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All DBs
Position
complement(3837672..3838982)
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AA seq
436 aa
AA seq
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MADARSVLARLRHGAALTTTDMQWVAQALADHGMSDAQAGAFAMGICARGLRDPERVALT
LAMRDSGKVLRWDMPGPVLDKHSTGGVGDCISLVLAPALAACGAYVPMISGRGLGHTGGT
LDKLEAIPGLVTQLDEGRFRAVVAEAGCAIVGASADIAPADRRLYAVRDVTSTVDSLDLI
TASILSKKLAAGLEGLVLDVKIGSGAFMKDAQAARALAQALVSTANAAECKTTALISDMS
QPLAPSLGNALEVAEVMRVLTGAADGPLVELSVALGGVLLANAGSVNDVQAGADAIRAAI
REGRAATQFGRMVAAMGGPVHFVENWQRFLPEATVIREVSALQSGRIAAIDGEALGLAVV
NLGGGRRIETDKIDRRVGLTQVVRLGAAVRKGQPLAVVHASRPDDADRAVAAVRAAISLT
DSATVAVPDLIHERVG
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atggcagatgcgcgttccgttcttgcgcggctgcgccatggtgcggccctgaccacgaca
gatatgcaatgggttgcacaggcgcttgcggatcacgggatgagtgatgcgcaggccggt
gcctttgccatggggatttgtgcccggggcctgcgcgatcctgagcgggtcgccctgacg
ctggcgatgcgtgacagcggcaaggtgttgcggtgggatatgccggggcctgtgcttgat
aaacactccaccggcggcgtgggcgattgcatttctctggtgcttgcgcctgcactggcg
gcctgcggggcctatgtgccgatgatatccggtcgcggcctcgggcataccggcggaaca
ctggataagctggaggcgataccgggtcttgtcacccaactggacgagggccggtttcgc
gccgtcgtggctgaggcaggttgcgcgatcgtaggggccagcgccgatatcgcgccggcg
gatcgcaggctttatgcagtacgagatgtgacctcgacggttgatagtcttgatctgatc
accgcgtcgatcctgtccaagaagcttgcagcgggccttgagggtctggtgctggatgtc
aagatcggcagcggcgcattcatgaaagatgcccaggccgcacgcgccctggcacaggca
ctggtcagcacggcgaatgctgcggagtgcaaaaccaccgcgctgatcagcgacatgagc
caaccgctggccccgagccttggcaatgcgcttgaggtggccgaagtcatgcgcgttctg
acaggtgccgctgatggcccgctggttgaactgtcggtcgcgctgggcggggtgctcttg
gccaatgcaggttctgtcaacgacgtgcaggccggggcggatgccatccgggccgcgatc
agggagggccgcgccgcgacccagttcgggcggatggttgccgccatgggagggccggtg
catttcgtggaaaactggcaacgcttcctgcctgaagcgaccgtgatccgcgaggtgtcg
gccctgcaatcaggtcgcatcgctgcgattgacggtgaagccttggggctggcggtggtc
aacctcggcggtggtcggcgcattgagacagacaagatcgaccgccgcgtgggcctgacg
caggtggtgcggcttggtgcggcagtgcgcaagggtcagcctttggcggttgtgcatgcc
agccgacccgatgatgcggaccgggcggtagctgctgtgcgcgccgcgatttcgctgacg
gacagcgcgacagtggctgtgccggacctgatacatgaaagggttggatga
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