Roseobacter denitrificans: RD1_3992
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Entry
RD1_3992 CDS
T00376
Symbol
dctM
Name
(GenBank) TRAP dicarboxylate transporter, DctM subunit, putative
KO
K11690
TRAP-type transport system large permease protein
Organism
rde
Roseobacter denitrificans
Pathway
rde02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
rde00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
RD1_3992 (dctM)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rde02000
]
RD1_3992 (dctM)
Transporters [BR:
rde02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
RD1_3992 (dctM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DctM
Motif
Other DBs
NCBI-ProteinID:
ABG33442
RoseoBase:
RD1_3992
UniProt:
Q161A1
LinkDB
All DBs
Position
complement(3850464..3851747)
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AA seq
427 aa
AA seq
DB search
MGILFLLGVFAFCVVIGTPVAFALGISALAAFWFEGLPLMIGFQRIVSGINVFALMAIPF
FIFAGELMFHGGIAMRLVKFASAAVGAVRGGLGIVNVFSSMLFGGISGSAIADISALGSI
LVPVMKEKGYDADYAVNVTVTSSIAGIIIPPSHNMIIFAIAAGGGISISKLFLAGVVPGI
LMCICLALAAYLVAVRRGYQAEAFPGWTALVIAFFGAIPGLLTAVIIVGGVLSGVFTVTE
SGAFGALYAFFVTLLVYRSITWLKFRTAVTQAVRTTAMVMILIACAGAFAYMLTFYQVPL
KTVDLLTGMTENPILILLMINLILLVLGMIMDMAALILICTPIFLPVAHSLGIDPIQFGM
ILLVNLGLGLCTPPVGSCLFVGCAVGKLPMEKAVRTIWPFYIAIFIALMLITFVPAISLT
LPNWVAG
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
gtgggcattttgtttctgctgggggtcttcgcgttctgcgtcgtgatcggtacgcccgtc
gctttcgcgcttggtatttccgcccttgccgccttctggttcgaagggctgcccctgatg
atcggctttcagcgcatcgtgagcgggatcaatgtttttgccctgatggccatcccgttc
ttcatctttgcaggcgagttgatgttccacggtggcattgccatgcggctggtcaaattc
gcctctgccgctgttggcgcggtgcgcggcggtctggggatcgtcaatgtgttttcctcc
atgctgtttggtggcatctccggctcggcgattgccgatatctccgcgctcggctccatt
ctggtccctgtgatgaaggaaaagggctatgatgcggattacgctgtcaacgtcaccgtg
acctcctccatcgcgggcatcatcatcccgcccagccacaacatgatcatctttgccatt
gcggcggggggcggcatttccatctcaaagctgtttctggccggtgtggtacccggcatc
ctgatgtgcatctgccttgcactggcggcctatcttgtggcggtaagacgtggctatcag
gccgaagcctttcccggctggacagcacttgtcatcgcgttcttcggcgcgatcccgggg
cttctgacggcggtcatcatcgttggtggcgtgttgtccggtgtctttacggtcactgag
tccggggctttcggagcgctttatgccttctttgtgaccctgttggtctaccgttcgatc
acctggctcaaattccgcacggcggtgacgcaggcggtcaggaccacggccatggtgatg
atcctgatcgcctgtgccggggcctttgcctatatgctgacgttttatcaggtgccgctc
aagaccgtggaccttttgaccggcatgacggaaaacccgatcctgatattgctgatgatc
aacctgatcttgctggtgcttggcatgatcatggacatggcggcgctgatcctgatctgc
acgccgatctttttgccggtggcccacagcctcgggatagacccgatacagtttggcatg
atcctgcttgtcaatctggggcttggtctgtgcacgccgccggtcgggtcctgccttttt
gtcggctgtgcggtcggtaaactgccgatggagaaagccgtgcgtacgatctggccgttt
tacatcgcgatctttatcgcgctgatgctgattacctttgtgcccgccatctcgctgacc
ttgccaaactgggttgcgggctga
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