Roseobacter denitrificans: RD1_3993
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Entry
RD1_3993 CDS
T00376
Name
(GenBank) C4-dicarboxylate ABC transporter, permease component, putative
KO
K11689
TRAP-type transport system small permease protein
Organism
rde
Roseobacter denitrificans
Pathway
rde02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
rde00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
RD1_3993
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rde02000
]
RD1_3993
Transporters [BR:
rde02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
RD1_3993
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DctQ
Motif
Other DBs
NCBI-ProteinID:
ABG33443
RoseoBase:
RD1_3993
UniProt:
Q161A0
LinkDB
All DBs
Position
complement(3851757..3852284)
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AA seq
175 aa
AA seq
DB search
MIDARPLPIFVKRMVAVLDALALICRVLTGVALVVLTIIFGWLVFGRYVLNATPTWVEQA
ALLLVMLIAFLGAAVGVHENTHLSVSLLRSSVPPKVRSFFVVISDVLMAGFGALMLWFGA
QLTMFKWGSLIPLIQLPEGLRSLPLTIGGGLILLFSVGHLIRLFLGVDDRSDTIE
NT seq
528 nt
NT seq
+upstream
nt +downstream
nt
gtgattgacgcgcgtccgcttcccatatttgtcaaacgcatggtggcggttctggatgcg
ctggccctgatctgccgcgtcctgaccggtgttgcactggttgttctgacgatcatattc
ggctggctggtattcgggcgttacgtgctgaacgcgacacccacatgggtggaacaggcg
gcgctgttgctcgtcatgctgatcgcctttctgggggccgctgtcggggtgcatgaaaac
acccacctctccgtatcgctgttgcgcagttctgtcccgccaaaggtccgcagctttttc
gtggtgatctcggatgtgcttatggctggcttcggcgcgctgatgctctggtttggcgca
cagcttacaatgttcaaatggggatccctgatcccgttgatccaattgcccgaagggctg
cgatcattgccgctgacaattggcggcgggctgatactgctgttttcggttggtcacctc
atccgcctgtttctgggcgtggatgaccgcagtgacaccatagaataa
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