Roseobacter denitrificans: RD1_4069
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Entry
RD1_4069 CDS
T00376
Symbol
xdhB
Name
(GenBank) xanthine dehydrogenase, B subunit
KO
K13482
xanthine dehydrogenase large subunit [EC:
1.17.1.4
]
Organism
rde
Roseobacter denitrificans
Pathway
rde00230
Purine metabolism
rde01100
Metabolic pathways
rde01120
Microbial metabolism in diverse environments
rde01232
Nucleotide metabolism
Module
rde_M00958
Adenine ribonucleotide degradation, AMP => Urate
rde_M00959
Guanine ribonucleotide degradation, GMP => Urate
Brite
KEGG Orthology (KO) [BR:
rde00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
RD1_4069 (xdhB)
Enzymes [BR:
rde01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.4 xanthine dehydrogenase
RD1_4069 (xdhB)
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GFIT
Motif
Pfam:
MoCoBD_2
MoCoBD_1
Ald_Xan_dh_C
Motif
Other DBs
NCBI-ProteinID:
ABG33513
RoseoBase:
RD1_4069
UniProt:
Q160T0
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All DBs
Position
3936115..3938412
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AA seq
765 aa
AA seq
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MSVAKPLPHDAARLHVTGDARYVDDVPSPADTLHLAFGVSALAHGKIKGMNLDPVRQAQG
VVAVLTAEDLPHTNDVSPAAHDEPLLAQGVVHYVGQPIFLVVATSHLAARHAARLGEIDI
DPLPALLTVDDALKANSRFEDGPRIYERGNLGDGFAAAEHVIDGQLDIGGQEHFYLEGQA
AIAFPQEGGDMLVSSSTQHPTEIQHKVAEALGVPMHAVRVETRRMGGGFGGKESQGNALA
VACAVAAGMLGRPCKMRYDRDDDMLITGKRHDFRVEYKVGVDARGRITAIDFTHLARCGW
AQDLSLPVADRAMLHADNTYYLPAVRITSHRLKTNTQSATAFRGFGGPQGVLGIERVMDH
VAATLDLDPLDVRHRNFYAAPGKGARNQTPYGQTVEDFIVPEMIARLRADCDYDARVQAV
ARWNAENRWIKKGIALTPVKFGISFTLTHLNQAGALVHVYQDGSVHLNHGGTEMGQGLFQ
KVAQVAAARFGIDTAQVKITATDTAKVPNTSATAASSGSDLNGMAVQAACDTIRDRMADL
LAQEHQCDPADVVFSDGIVSVAGAEYSFADVAQKAYLARVSLSATGFYKTPKLEWDRIRG
KGRPFFYFAYGVAATEVAVDTLTGENRILRADIIHDAGASLNPSLDIGQVEGGYVQGVGW
LTTEELVWDDQGRLRTHAPSTYKIPACSDRPDVFNVSLWDAPNTEDTVYRSKAVGEPPLM
LGISAFSALSQAVQSCGPAYADLQAPATAEAILKAINRTRKEVWD
NT seq
2298 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtcgccaaaccgcttccccatgatgccgctcgcctgcatgtcaccggcgatgcc
cgctatgtcgatgatgtccccagccccgccgacacgctgcatcttgcatttggcgtatcc
gcgctcgcccatggcaaaataaagggtatgaacctcgaccctgtgcgacaggcgcaaggg
gttgtcgcggtgctgaccgcagaggatctgccccacacgaatgacgtctcccccgccgcc
catgacgaaccgctcttggcgcaaggggtggtacactatgtcggccagcccattttcctc
gtcgtggccacgtcgcatctggcagcacggcacgccgcacgccttggggagatcgacatc
gaccccctgcccgcgctgctgacggttgatgacgcgctcaaagcaaacagccgctttgaa
gacggcccgcgcatctacgaacgcggcaaccttggagacggtttcgccgctgcggaacat
gtgatcgacgggcagcttgacatcggcggtcaggagcatttctacctcgaaggtcaggcg
gctatcgctttcccgcaagaaggcggcgatatgctggtcagcagttccacccagcacccc
actgaaatccagcacaaagtggccgaagccctgggcgtgcccatgcatgcggtccgggtc
gaaacccggcgcatgggcggcggtttcggcggaaaagagagccaaggcaacgccttggcc
gttgcctgcgccgtggcggcaggcatgctaggccgcccctgcaagatgcgatatgaccgt
gatgatgatatgctcatcaccggcaagcggcacgatttccgtgtcgaatacaaggttggc
gttgatgcccgcggccgtattacagccattgatttcacacatcttgcgcgctgcggatgg
gcgcaggatctgtccctgccggtggcggatcgcgcgatgctgcatgcggacaatacctat
tacttgcctgccgtgcgcatcaccagccacaggctgaaaacaaacacgcaaagcgcgacg
gcctttcgggggtttggcggcccgcaaggggtgctcgggattgagcgtgtcatggaccat
gtagctgccacgcttgatctcgacccgctcgatgtgcggcaccggaatttttacgcagca
ccgggtaaaggggcgcgcaatcaaaccccttatggccaaacggtcgaagacttcatcgtc
ccggaaatgatcgcccggctgcgcgcagactgtgactatgacgcacgcgttcaggctgtc
gcacggtggaatgcagaaaaccgctggatcaaaaagggcatcgccctgacaccggtcaaa
ttcggtatttcctttacgctcacgcatcttaatcaggcgggtgcgttggtgcatgtctat
caggatggatcagtgcacctgaaccacggtggcacggaaatgggacaggggttgtttcaa
aaggtggcgcaggtcgccgccgcgcgcttcggtatcgacaccgcacaggtcaagatcacc
gcgacggataccgccaaagtgcccaatacctccgccaccgccgcatcatcgggaagcgat
ctgaacggcatggccgtacaggcggcctgcgataccattcgagaccgtatggccgatctg
ctggcgcaggagcatcaatgcgacccggcggatgtggtgttcagcgatggcatcgtgtca
gttgccggcgctgaatacagttttgcggatgtcgcacaaaaggcataccttgcgcgggtc
agcctgtctgcgaccgggttttacaagaccccgaaactggaatgggaccggatcaggggc
aagggccgcccgttcttttactttgcctatggcgtcgcggcgacagaggttgcggtcgat
acgctgaccggggaaaaccgcatcctgcgcgctgatatcatccatgatgcaggcgcctct
ctgaaccccagccttgatatcgggcaggtcgaggggggctatgtacagggggtcggatgg
ctgacaaccgaggaactggtctgggacgatcagggccgtttgcgcacccatgcgccctcc
acctacaagatccccgcctgttcggaccgacccgatgtgttcaacgtctcgctctgggac
gcgcccaacaccgaagacactgtttaccgttcaaaagccgtgggagaacccccgttgatg
ctgggtatttcggcattttccgccctgtcgcaagcggttcaatcctgtggcccggcctat
gcggacctgcaggccccggcgactgccgaggcgattttaaaggcgataaatcgcacccgc
aaagaggtttgggactaa
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