Roseobacter denitrificans: RD1_4081
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Entry
RD1_4081 CDS
T00376
Name
(GenBank) OmpA domain protein
KO
K03286
OmpA-OmpF porin, OOP family
Organism
rde
Roseobacter denitrificans
Brite
KEGG Orthology (KO) [BR:
rde00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rde02000
]
RD1_4081
Transporters [BR:
rde02000
]
Other transporters
Pores ion channels [TC:
1
]
RD1_4081
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OmpA
BON
DUF748
VirK
Motif
Other DBs
NCBI-ProteinID:
ABG33525
RoseoBase:
RD1_4081
UniProt:
Q160R8
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Position
3948730..3950607
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AA seq
625 aa
AA seq
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MPLSRAHLVVTTFAIAAGASLLAASYSVNVIEDRSETEIRYLLDRNGLTWAEVEADGLQV
MMAGVAPTEALRFQALSLAGSIVDAARVVDEMEVAAVAELEAPRFSAEVLRNTAGLSVIG
LIPQSTDRAALIDGFSAMSDLPITDLLETADYPAPTGWEDAVAYAITAIKDLPRAKVSVE
AGRVSITAIAQSAADKAQMEAHLFRIAPPALRVSLNITAPRPVITPFTLRFVKDENGTRF
DACSADTDEARGRILDAAFRAGLTGPGRCTVGMGVPSPSWTDAVVDAIDALNALGDGTVT
FSDADITLAAAEGTQPALFDRVIGELEATLPDVFVLNAVLPLPDEKDSGPSEFIATLSPE
GQVQLRGRMPGEAIRDVADSFAKAKFGSDNVYTATRNVADLPMDWSIRVLAGIEALGFLN
SGAVTVTPDRVTLSGRSGNAEASEAIARLMVEKLGNDAAFDVDVAYVEALDPVAALPTAE
ECEAKIADIMAGEKINFEPGSATIDAAALTTMDQIADVLRVCGDLKLEVQGHTDSQGREE
MNRSLSQARAQSVLNELRARRVLTSNFIAKGYGESNPIADNDTEEGREANRRIEFKLIRP
EPSVPEGESALESIAEKSDTVTETE
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atgccactttctcgcgctcacctcgttgtcacaacctttgcgattgccgcaggcgcatcc
ttgctggcggcgagctattccgtaaatgtcatagaagacaggtcagagactgaaatacgc
tatctgctcgatcgcaacgggctgacctgggccgaagtcgaggccgacgggctgcaggtc
atgatggcgggcgttgcaccgaccgaagcgctgcggtttcaggccctgagtctcgccgga
tccatcgtggatgccgcgcgcgtcgtggatgagatggaagtggccgcagttgccgaactg
gaggcaccccggttttccgcagaagtgctgaggaatactgccggtctttcggtcatcggg
ctgatcccgcaaagcactgatcgcgccgcactcatcgacggcttttccgccatgagcgat
ctgcccatcaccgacctgctggaaactgccgactaccctgccccaaccgggtgggaggac
gccgtggcctatgccatcaccgccatcaaggatctgccgcgcgccaaagtgtcggtcgag
gccggtcgcgtatcaatcaccgccattgcacaaagcgcggcagacaaggcgcagatggag
gcgcatctgttccgcatcgccccgccggcgctgcgcgtctctttgaatatcacagcgccg
cgcccggtgatcacgccttttacgctgcgtttcgtgaaagacgaaaatggtacgcgattt
gatgcttgttctgccgatacggatgaggcgcggggccgtattctggatgcagcgttcagg
gccgggctgacgggtccgggtcgctgcactgttggcatgggcgtgccatccccttcgtgg
accgatgcggtcgtagacgccattgacgcgcttaacgccttgggggatgggacggtcacc
ttttccgacgcagacatcacccttgcggccgccgagggcacgcagcccgcactctttgac
cgggtcatcggggagttggaggcgaccctgcccgatgtcttcgtgctaaacgccgttttg
cccttgcccgatgaaaaagacagcggcccgtctgaattcatcgcaaccctcagccccgaa
gggcaggtacagttgcgcggacggatgccgggtgaagcgatacgcgatgttgcggacagc
tttgccaaggccaaattcggatcagacaacgtctatacggccacgcgcaatgtcgcggac
ctgcccatggattggtcgatacgcgttcttgccggcatcgaagcgctcggtttcctcaac
agcggagctgttacggtcacgcccgaccgcgtcaccctgtcaggacgttcgggcaatgcc
gaggccagcgaggcgattgcgagattgatggtggagaagctgggcaatgacgccgccttt
gatgtcgatgtcgcctatgtcgaggcgctcgaccctgttgcggcgctgcccactgcggag
gaatgcgaggcaaagattgccgacatcatggccggggaaaagatcaactttgaacccggg
tcggccacgatagatgcggcagcgctcaccacgatggatcagatcgccgacgttttgcgg
gtctgtggcgatctgaagcttgaggtgcagggccataccgacagtcaggggcgcgaagaa
atgaaccgctcgctcagtcaggcgcgggcgcaatcggtgctgaacgagttgcgcgcgcgc
agggtgctgacgtcaaacttcattgccaagggctacggggaatcgaacccgattgcggat
aatgacaccgaagaggggcgcgaggccaaccggcgcatcgaatttaaactgatccggccg
gaaccaagcgtgccagagggcgaatctgcgctggaaagcatcgccgaaaagagcgataca
gtgacagaaacggaatga
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