Roseobacter denitrificans: RD1_4102
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Entry
RD1_4102 CDS
T00376
Name
(GenBank) TRAP dicarboxylate transporter, DctM subunit, putative
KO
K11690
C4-dicarboxylate transporter, DctM subunit
Organism
rde
Roseobacter denitrificans
Pathway
rde02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
rde00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
RD1_4102
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rde02000
]
RD1_4102
Transporters [BR:
rde02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
RD1_4102
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DctM
Motif
Other DBs
NCBI-ProteinID:
ABG33544
RoseoBase:
RD1_4102
UniProt:
Q160P9
LinkDB
All DBs
Position
3970037..3971398
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AA seq
453 aa
AA seq
DB search
MTDGSWITLISLGVTALFMLGTPVLLVIFYWVIGCSFVIGLPLANTGNELINVFSKGFAL
LAMPLFILTGDLINQSGIARRLSNFAYSCLGWLRGGLAMASIAACGLFAAISGSNSATTA
TIGSMLHPEMVKGNYDERFSAATAAAGGTVGIIIPPSIIFIVYGFLMNLPISELFIAGIV
PGTLMVLAMMTVAFIVCTINGWGILIGLSFQRVIKTAFGAWLGFFAIGLVLWGIYTGKFS
PTEAAGVTVGFCVFVGLLCYPLNKVLGSDADVPVEQKSFLSMFVVEGFTLPSVPAIVSRS
AQITGILVPLIAVSVAMQQVLSSLGAKEYIGAFVTGMGGYYAVLFTAMAIVFITGMILES
LPVTIILAPILAPIAVSVGVDPVHFAVVFLVGASIGFITPPYGLNLYVASGVTGVPYFRL
LRFSTMYLASLLIVWIFVALTPITALWLVGFMQ
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgacagatggatcctggattacccttatttcgctcggcgtcacggctttgttcatgctc
ggcacgcctgtgttgctcgtcatcttttactgggtcatcggctgcagctttgtgatcggt
ctgccactggccaacacgggcaacgagttgatcaacgtgttcagcaaaggctttgccctg
cttgccatgcccctcttcatcctgaccggggatttgatcaaccaatccggcatcgcgcga
cgattgtcgaattttgcctattcctgtctggggtggctgcgcggcggtttggccatggca
tccatcgcggcttgcgggcttttcgcggcgatctcggggtcgaactcggccacaacggcc
accatcgggtcgatgctgcatcctgaaatggtcaagggcaactacgacgaacgcttctct
gcggccacggcggcggcgggcggcacggttgggatcatcattccaccgtcaatcatcttt
atcgtctacgggttcctgatgaacctgccgatttccgaattgttcatcgcgggtatcgtg
cccggaacactgatggttcttgccatgatgacggttgcgttcatcgtctgcaccatcaac
ggctggggtatcctgatcggtctgtcctttcagcgggtgatcaagaccgcgttcggggcg
tggctcgggttctttgccatcggcctggtgctctggggcatttacaccggcaagttttcc
ccgaccgaggctgcgggtgtgaccgttggtttctgtgtgttcgtgggtctgctgtgctat
ccgctcaacaaggtcttgggcagtgacgcagatgtccccgttgaacaaaagagctttctg
tcgatgtttgtcgtcgaagggttcaccttgccgagcgtgccggccattgtgtcccgctcc
gcgcagatcacaggcattctggtgcccctgatcgcggtgtcggtcgccatgcaacaggtc
ctgtcatcgctgggtgcgaaggaatacatcggcgctttcgtgacaggaatgggcggatac
tacgcggtgctgtttaccgcgatggcaatcgtcttcatcacgggcatgatccttgaatcc
ctgccggtgacgatcatccttgcgccgatcctcgcgccaattgctgtatctgtcggtgtc
gatccggtccactttgcggttgtcttccttgtcggtgcgtcaattgggttcattacgccg
ccctacgggttgaacctatatgttgcctcaggggttaccggggtgccatatttccggctg
ctcagattctccacgatgtaccttgcatcgctgctgatcgtttggatatttgtcgccctc
acgccgatcaccgctttgtggttggttggcttcatgcagtaa
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