Roseobacter denitrificans: RD1_4122
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Entry
RD1_4122 CDS
T00376
Name
(GenBank) sugar ABC transporter, periplasmic sugar-binding protein, putative
KO
K17321
glycerol transport system substrate-binding protein
Organism
rde
Roseobacter denitrificans
Pathway
rde02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
rde00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
RD1_4122
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rde02000
]
RD1_4122
Transporters [BR:
rde02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Glycerol transporter
RD1_4122
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_1
Motif
Other DBs
NCBI-ProteinID:
ABG33563
RoseoBase:
RD1_4122
UniProt:
Q160N0
LinkDB
All DBs
Position
complement(3990945..3992678)
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AA seq
577 aa
AA seq
DB search
MRKYLLSATAAMAVIAGSGTAFADTAAAQKWIDQEFQPSTLTKEEQLAEMEWFIQAAEPF
EGMEINVLSEGIPTHGYESEVLTKAFEEITGIKVNHQILGEGEVVQAVQTQMQTRRNLYD
GYVNDSDLIGTHSRLQLAYNLTEQMAGEWADTTSPTLDLDDFMGIQFTTGPDGNLYQLPD
QQFANLYWFRKDWFDREDLKAAFREKYGYELGVPVNWSAYEDIAEFFSNDVKEIDGVRIY
GHMDYGKRAPDLGWRMTDAWLSMAGAGSVGEPNGVPIDEWGIRMEAGTCNPVGASVTRGG
AANGPAAVYAIRKWDEWLRNYAPPGAASYDFYQSLPALAQGNVAQQIFWYTAFTADMVKP
QSEGNNTVDADGNPLWRMAPSPHGPYWTEGQKVGYQDVGSWTFLKSTPSDRAQAAWLYAQ
FVTSKTVDVKKSHVGLTFIRDSTVNHESFTERAPKLGGLVEFYRSPDRTAWSPTGINVPD
YPKLAQIWWQQIGDVNSGAFTPQEAMDRLAEEMDITMARMQQADEAANVYGGCGPRLNEE
RDAEFWFANGGAKPKLENEKPQGETVNYDDLVARWNQ
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaagtatctgctctccgcgactgcggctatggccgtcatcgcggggtctgggacc
gcttttgccgatacggctgcggctcagaaatggattgatcaggaattccagccatcgacc
ctgacgaaagaagaacagctcgctgaaatggagtggttcattcaggcggcggagcctttc
gagggtatggaaatcaacgtcctgtccgaagggattccgacccacggatatgaatccgag
gtgctgacgaaagccttcgaagagatcaccgggatcaaggtaaaccaccagattcttggt
gagggcgaagtcgtgcaggcggtgcaaacgcaaatgcagacccgtcgcaacctttatgac
gggtatgttaacgattccgacctgatcgggacgcactcacggttgcagctggcctataat
ctgaccgaacagatggccggtgaatgggcggatacgacgtcgccgacgctggaccttgat
gacttcatgggcattcagttcacaacgggtcccgacgggaacctttatcagttgcccgat
cagcagttcgcgaacctctattggttccgcaaggactggtttgaccgcgaagacctcaaa
gcggccttccgggaaaaatacggctatgaattgggtgtgccggtcaattggtccgcctat
gaggacatcgccgagttcttttccaatgatgtgaaagaaatcgacggcgtcagaatttat
ggccatatggactacggcaaacgcgcccctgatctgggctggcgcatgactgacgcgtgg
ctgtccatggccggagcggggtcggtcggggaacccaacggcgtgccgattgatgaatgg
ggcatccggatggaagcgggaacgtgcaacccggtcggcgcatccgtaacccgtggcggt
gcggcgaacggcccagcggcggtctacgcgatccgcaaatgggatgagtggctgcgcaac
tatgcacctcccggcgcggcaagctatgatttctaccagtcgttgccagcgcttgcgcag
ggtaacgtggcacagcagatcttctggtatacggcctttaccgcagacatggtgaaaccg
cagtcggaaggcaacaacaccgttgatgcggatggcaacccgctctggcggatggccccg
agcccgcatggtccctattggaccgaaggacagaaggtcggctatcaggacgtaggctcc
tggaccttcctgaaatcaaccccgtctgatcgtgcgcaagcggcgtggctttatgcgcag
tttgtcacctccaagaccgttgacgtcaagaaatcgcatgtgggtctgacctttatccgc
gacagcacagtgaaccacgaaagcttcaccgaacgcgcgcccaaactgggcggtctggtg
gaattctaccgctcgcccgaccggactgcatggtcgccgaccggcatcaacgtgcctgac
taccccaagctggcgcagatctggtggcagcagatcggtgatgtgaactccggtgcattc
acaccgcaggaagcgatggaccgtctggccgaagagatggacatcaccatggcgcggatg
caacaggcggatgaagcggctaacgtctacggcggctgtggcccgcgcctgaacgaagag
cgtgatgccgagttctggttcgccaacggtggtgccaagcccaagctggaaaacgaaaag
ccgcaaggcgagacggtcaactacgacgatctcgttgcgcgctggaaccagtaa
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