Roseobacter denitrificans: RD1_4128
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Entry
RD1_4128 CDS
T00376
Symbol
potD
Name
(GenBank) spermidine/putrescine ABC transporter, periplasmic substrate-binding protein
KO
K11069
spermidine/putrescine transport system substrate-binding protein
Organism
rde
Roseobacter denitrificans
Pathway
rde02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
rde00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
RD1_4128 (potD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rde02000
]
RD1_4128 (potD)
Transporters [BR:
rde02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Spermidine/putrescine transporter
RD1_4128 (potD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_1
SBP_bac_6
SBP_bac_11
PBP_like_2
Motif
Other DBs
NCBI-ProteinID:
ABG33568
RoseoBase:
RD1_4128
UniProt:
Q160M5
LinkDB
All DBs
Position
complement(3997419..3998447)
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AA seq
342 aa
AA seq
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MKLLNSTALATALFATSVAAEGELVLYHWFGYMPQELLEKFTAETGINVTMDTYDSNEAM
LASLKAGGMGTYDLAVPGDYMVEIMEGEGLLDTIADGELANKGNIAPEWADPSFDPGRKH
SIPYQWGSTAFAVDTDAFSGNINTTDILFNPPAELSGKINMLDSQGEVLAMAALHMGIPQ
CSTDRAQLSALNDMLQEAKTHWASFNSDTAKEVLVSGDVDVGMIYDGFSAKARAEKASIT
YAFPAEGYVVWMDNVVLLNDAPNRDNAIKFMDFLLEPENIAAVSNYARYGNGVTGTGEFL
DPELATLPESNPPAEAGAGAFIQVCDEATQAVYDQIWVNLKK
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgctcaattccactgccctcgccaccgcattgtttgccaccagcgtggctgcc
gagggcgagttggttctttatcattggtttgggtacatgccgcaggaattgctggaaaaa
ttcaccgctgagaccggcataaacgtcaccatggatacatatgattcaaacgaggcgatg
ctggcatccctcaaggccggtggcatggggacctatgaccttgccgttccgggcgactat
atggttgagatcatggagggcgaagggttgctcgacacgattgcggatggtgaacttgcc
aacaagggcaatatcgcgccggaatgggcggacccgagctttgatcccggacgcaagcat
tcaattccctatcaatggggctcaaccgcgtttgccgtcgataccgatgccttcagcggg
aatatcaacacgacggatattctgtttaacccgcctgccgaactgtcgggaaaaatcaac
atgctcgacagtcagggcgaggttctggccatggcggccctgcatatgggcatcccgcag
tgttcaacggatcgcgcgcaactcagcgctctgaacgatatgctgcaggaggccaaaacg
cattgggcgtctttcaactctgacaccgccaaagaggttcttgtgtccggtgatgtggat
gttggcatgatctatgacggtttcagtgccaaggcgcgcgcggaaaaagcgtcgatcact
tatgccttccccgccgaaggatacgttgtctggatggacaatgtggtcttgttgaacgac
gcgcctaaccgggacaacgccatcaaattcatggatttcctgctggaacctgagaacatc
gcggctgtgtcgaattatgcccgctatggcaacggcgtgacgggcaccggcgaattcctc
gacccggaactggcgacactgcccgagtcaaacccaccggcagaagcgggtgcgggcgcc
tttattcaggtttgcgatgaggcgacacaggcggtgtacgaccagatttgggtcaacctg
aaaaagtag
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integrated database retrieval system
