Roseobacter denitrificans: RD1_4233
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Entry
RD1_4233 CDS
T00376
Symbol
fdhB
Name
(GenBank) formate dehydrogenase, beta subunit
KO
K22515
formate dehydrogenase beta subunit [EC:
1.17.1.9
]
Organism
rde
Roseobacter denitrificans
Pathway
rde00630
Glyoxylate and dicarboxylate metabolism
rde00680
Methane metabolism
rde01100
Metabolic pathways
rde01120
Microbial metabolism in diverse environments
rde01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
rde00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
RD1_4233 (fdhB)
09102 Energy metabolism
00680 Methane metabolism
RD1_4233 (fdhB)
Enzymes [BR:
rde01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
RD1_4233 (fdhB)
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GFIT
Motif
Pfam:
Complex1_51K
2Fe-2S_thioredx
NADH_4Fe-4S
SLBB
SLBB_2
Motif
Other DBs
NCBI-ProteinID:
ABG33669
RoseoBase:
RD1_4233
UniProt:
Q160C4
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All DBs
Position
4107162..4108844
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AA seq
560 aa
AA seq
DB search
MSLDDTGIWKSGRGKGRKTPKGRQYDDVALEEVQALIGSRPLDRDLLIEFLHLIQDAYGH
LSARHLRALAEVMRLSMAEVYEVATFYAHFDVVKENETPPPALTIRVCDSLSCELAGAQQ
LKAALEDGLDPTEVRVLRAPCMGRCDTAPVLELGHHHIDHATPEKVRAAIAANHTHADIP
DYETFAKYQAEGGYTALQDLRENGDWEAVQDKVLASGLRGLGGAGFPSGKKWGFVRANPG
PRYLAVNGDEGEPGTFKDRYYLERTPHLFLEGMLIAAWAVEAERCYIYMRDEYPAVLHIL
AEEIKALEDAGIVAPGFIDLRRGAGAYICGEESAMIESIEGKRGLPRHRPPYVAQVGLFG
QPTLVHNIETLHWVARICREGPETLSSTEKNGRVGLRSYSVSGRVAKPGVYLLPAGSTIT
DIIEAAGGMAEGHVFKAYQPGGPSSGLLPASINDVPLDFDTLQPLGTFIGSAAVVVLSDQ
DKARDAALNMLRFFEDESCGQCTPCRVGCEKAVKLMQADKWDTDLLDELSTAMVDASICG
LGQAAPNPIRLTMKHFPEEI
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttagatgacacaggtatctggaagtccggacgcgggaagggtcgcaagactccg
aagggtcggcagtatgatgatgtggcgcttgaagaagtgcaagcgctgatcggctcgcgt
ccattggaccgtgatttgctgatcgaatttcttcatctgattcaggacgcttacgggcac
ctttccgcgcggcacctgcgggcactggccgaggtgatgcgcctgagcatggccgaggtc
tatgaagtcgcaaccttctatgcgcattttgatgtggtgaaggaaaacgagacgccgccg
cccgccttgaccatccgcgtctgtgattccctgtcctgcgaacttgccggtgcgcagcag
ctgaaggcggcgcttgaggatgggcttgatccgaccgaggtgcgcgtgctgcgcgcgccc
tgcatgggccgttgtgacacggctcccgttctggaactgggccatcatcacattgaccac
gccacgcccgaaaaggtgcgggccgcaatcgctgcgaaccatactcatgcggatatcccc
gactatgaaaccttcgccaagtatcaggcggagggcggatacaccgctttgcaggacctg
cgcgaaaacggcgactgggaagcggtgcaggataaggtgctggcatccggcctgcggggt
ctgggcggcgcaggcttcccgtcggggaagaagtggggctttgtgcgcgccaaccccggc
ccacgctatctggcggtgaacggggacgagggcgagccgggtacgttcaaggaccgctat
tacctcgaacgcacgccgcatctgttccttgagggcatgttgatcgccgcttgggctgtc
gaggccgagcgctgctatatctacatgcgcgatgaataccctgcggtgctgcatatcctc
gccgaagagatcaaggcgcttgaggatgcggggattgtcgcccccggatttatcgacctg
cgtcgcggggccggtgcctatatctgcggcgaagaaagcgcgatgatcgaaagcatcgag
ggcaaacgcggattgccacgccaccgcccgccttatgtcgcgcaggtcggtctgtttggg
cagccgacgcttgtgcacaatatcgaaaccctgcattgggttgcgcgcatctgccgcgaa
gggcccgaaaccctgtcgtcgacagaaaagaacgggcgcgtcgggttgcgcagctattcg
gtgtcgggccgtgtggccaagccgggtgtctatctgttgccggctggctccacgatcacc
gatattatcgaggcggcaggcggcatggccgagggtcatgtattcaaagcctaccagccc
ggcggcccttcctcgggtcttctgcccgcgtcgatcaacgatgtgccgctggatttcgac
acgctgcaaccgcttggcacgttcatcggctccgcggctgtggtggtactgtctgatcag
gacaaagcccgcgatgcggcgctgaacatgctgcgctttttcgaggatgaaagctgcggt
cagtgcacgccctgtcgtgtcggctgcgaaaaggcggtcaagctgatgcaggcggataag
tgggataccgatctgctggacgagttgagcaccgcgatggtcgacgcgtcgatctgtggt
cttggacaggcggcaccgaatccgatccgcctgaccatgaagcattttccggaggagatt
taa
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