Roseobacter denitrificans: RD1_4248
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Entry
RD1_4248 CDS
T00376
Symbol
ppc
Name
(GenBank) phosphoenolpyruvate carboxylase
KO
K01595
phosphoenolpyruvate carboxylase [EC:
4.1.1.31
]
Organism
rde
Roseobacter denitrificans
Pathway
rde00620
Pyruvate metabolism
rde00680
Methane metabolism
rde00710
Carbon fixation by Calvin cycle
rde00720
Other carbon fixation pathways
rde01100
Metabolic pathways
rde01120
Microbial metabolism in diverse environments
rde01200
Carbon metabolism
Module
rde_M00168
CAM (Crassulacean acid metabolism), dark
Brite
KEGG Orthology (KO) [BR:
rde00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00620 Pyruvate metabolism
RD1_4248 (ppc)
09102 Energy metabolism
00710 Carbon fixation by Calvin cycle
RD1_4248 (ppc)
00720 Other carbon fixation pathways
RD1_4248 (ppc)
00680 Methane metabolism
RD1_4248 (ppc)
Enzymes [BR:
rde01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.31 phosphoenolpyruvate carboxylase
RD1_4248 (ppc)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PEPcase
Motif
Other DBs
NCBI-ProteinID:
ABG33683
RoseoBase:
RD1_4248
UniProt:
Q160B0
LinkDB
All DBs
Position
4124362..4126977
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AA seq
871 aa
AA seq
DB search
MAAALDTQAGPGPASDAGDLYQCLRAAWSRVLERRAPQLLDATQQDGAQWHRDHYGDHLQ
ASTIWFHLQQVLNEVQTLRSLRQEATNGKLHGFAEVVADCPEDQRAAMKRLLQDGRLSVG
PTITAHPTEAKRVTVMEIHRRIYALLCCADDTARLAEVSTSLEMEIDLLWLTGELRMERP
SLAAEVEWGLQFYDASLFDAVPRLFQRYRTAVRSAFGAEVDDHCCLRFHSWIGGDRDGNP
NVTAEVTRQALARSREMVLNAYVRALEKIVPRLSISTKIVPLPADHLQALERIVDQRSTD
AESCKQRNPNEVFRQAGFAIRDAVAAGRYAHISDFLADLSVLENALNAIGATALAGQLIR
PLRWQATTFGFRGHTLDIRQNSDVVTRTLQAVWAAVDASPEPLGSAWSERLQREVRQETL
PTLDGLELSEEASELLALLALVRDVHEGSDPDAIGPFVLSMTRSADDLLAVLLLARYVGF
DAHQPSLRVVPLFETIEDLQAAPVILRDVLAVPIAARSMKSSGGRIEIMLGYSDSNKDGG
FLCSSWSLDRAQRAITRTLAQQGATPVFFHGRGGSVSRGGAPTDRAIAAQPCGTLNGALR
LTEQGEVVTAKYANADTAVTQLELLASSVLRHSASPPFETVDPEGEDVMETLSSLSQTAY
QNLLRHPGFLDYFNQASPVNELALLKIGSRPARRFGAASLSDLRAIPWVFAWSQNRHMIS
SWYGFGQAIQDFRRVRGSVGDAALERISRKLPLFQLCLDEIEKSLMLVRLDIAELYARLV
SDRAMAEDVFGRIRDEYNRSVDAIETLTGAPLGTRFPNAADRIHRHEDTLRAAHHAQVAL
LKDVRASDAQTARIRLMQSMNCISAGLGWTG
NT seq
2616 nt
NT seq
+upstream
nt +downstream
nt
atggcagctgcattggacactcaggcgggcccgggcccggcatcggatgcgggcgatctg
tatcagtgcctgcgcgcggcatggtcccgcgtattggaacgtcgcgcgccgcagcttctg
gacgcaacgcaacaggatggggcgcagtggcaccgcgaccactacggcgatcatcttcag
gccagtaccatctggtttcacctgcagcaggttttgaatgaggttcagaccctgcgcagc
ctcagacaagaagcgacaaatggaaagttacatggctttgcagaagtcgtcgcagactgc
ccggaggatcagcgcgcggcgatgaagcggctgctgcaggatgggcgcctcagtgttggc
cccacgatcaccgcgcatccgaccgaagcaaagcgcgtgaccgtaatggaaattcaccgt
cggatttatgcgctgctttgttgcgcggacgacacggcacgccttgccgaggtgagcaca
tcgcttgagatggaaatcgacctgctgtggctcacgggtgagctacggatggagcgccca
tcgctcgccgccgaggtagagtgggggctgcaattctatgacgcgagcctctttgatgcc
gtgccccgcctgtttcagcggtatcgcaccgctgtccgctcggcctttggcgctgaagtc
gatgatcattgctgtcttcgctttcattcctggattggcggggatcgcgacggcaacccc
aatgtcacggccgaggtgacacgtcaggcgctggcccgatcccgtgaaatggtcctgaac
gcctatgtgcgcgcattggaaaagatcgtgccgcggctgagcatctcgacaaaaatcgta
ccgctccctgcggatcatctccaagcgcttgaacgcattgtcgatcaacgcagcacggat
gccgaaagctgcaagcagcgcaacccgaacgaggtgtttcgccaggcgggttttgcgatc
cgcgacgcggtggctgcgggcagatacgcgcatatctctgacttccttgccgatttgtcg
gttctcgaaaacgcgttgaacgccatcggcgcaacagcgctggccggtcaactgatccgg
cccctgcgctggcaagccaccacattcggctttcggggccatacgctcgacattcgccag
aactccgacgtggtgacacggacacttcaggccgtctgggccgccgttgacgcatctccc
gagccgcttggctccgcgtggtccgaacggttgcagcgcgaggtgagacaggaaacgtta
ccgacccttgacggcctcgagctgtccgaagaggccagcgagcttctggcgctgctggcg
ctggtgcgcgatgtgcatgaggggtctgacccggatgcgatcgggcctttcgttctgtcc
atgacgcgttctgccgatgatcttttggcggttctgctgcttgcaagatatgtgggcttt
gatgcgcatcaaccctccctgcgggttgtccccttgttcgaaaccatcgaggatttgcag
gcagcgcccgtgatcctgcgcgatgttttggcggtcccgattgccgcgcgcagcatgaaa
tcatccgggggccggatcgagatcatgctcggctattcggacagcaacaaggatggtggc
ttcctgtgctcaagctggtcgctcgaccgggcgcaacgggccatcacgcgaacgcttgca
cagcagggcgcaacgccggtgttctttcacggtcgtggcggttcggtcagccggggcggc
gcgcccaccgaccgcgccatcgccgcgcagccctgcggcaccctgaacggagcattgcgc
ctgaccgagcagggcgaggttgtcacggcaaaatacgccaacgcggacacggcggtgaca
cagcttgaactgctcgcctcttcggtgttgcgtcacagtgcatcaccccccttcgaaacc
gtcgatcccgaaggcgaagacgtgatggaaacactgtcgagcctcagccagaccgcctat
cagaacctgctgcgccatcccggcttccttgactacttcaatcaggccagccccgtgaac
gaacttgccctgctcaagatcggctcgcggcccgcgcgccggttcggggcggcgtcactg
tcggatttgcgcgccatcccttgggtctttgcctggagccagaatcgccacatgatcagc
agttggtacggcttcggtcaggccattcaggatttccgcagggtgcgggggagcgtcggc
gacgctgcactggagcggatttcgcgcaagctgcccctctttcagctttgtctcgatgaa
atcgaaaagtcgctgatgttggtgcggctcgatattgcggaactctatgcccggctggtg
tctgatcgggcgatggcagaggatgtgttcgggcgtatccgtgatgaatataaccggtcc
gtggatgccattgaaacgctgacgggtgccccacttggcacacgtttcccgaacgcggcg
gatcgcatccaccgtcatgaggacacgttgcgcgccgcgcatcatgcgcaagttgcgctc
ctgaaagacgtgcgcgcaagtgacgcgcaaaccgcacgcattcgcctgatgcaaagcatg
aactgcatttccgctggtcttggctggacaggttaa
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