Roseobacter denitrificans: RD1_C0014
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Entry
RD1_C0014 CDS
T00376
Name
(GenBank) DNA-cytosine methyltransferase, putative
KO
K00558
DNA (cytosine-5)-methyltransferase 1 [EC:
2.1.1.37
]
Organism
rde
Roseobacter denitrificans
Pathway
rde00270
Cysteine and methionine metabolism
rde01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rde00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
RD1_C0014
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rde03000
]
RD1_C0014
03032 DNA replication proteins [BR:
rde03032
]
RD1_C0014
03036 Chromosome and associated proteins [BR:
rde03036
]
RD1_C0014
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
rde02048
]
RD1_C0014
Enzymes [BR:
rde01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.37 DNA (cytosine-5-)-methyltransferase
RD1_C0014
Transcription factors [BR:
rde03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
RD1_C0014
DNA replication proteins [BR:
rde03032
]
Eukaryotic type
DNA Replication Termination Factors
DNA methylation enzymes
RD1_C0014
Chromosome and associated proteins [BR:
rde03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
RD1_C0014
Prokaryotic defense system [BR:
rde02048
]
Restriction and modification system (R-M system)
Type II R-M system
DNA methyltransferases
RD1_C0014
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_methylase
Motif
Other DBs
NCBI-ProteinID:
ABI93479
RoseoBase:
RD1_C0014
UniProt:
Q07GC0
LinkDB
All DBs
Position
pTB3:complement(13627..14811)
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AA seq
394 aa
AA seq
DB search
MPVSNTGNPMFKFYEFFAGGGMARAGLGEGWKCEFANDFDRKKGATYKKNWGDGEMIVDD
IRNIGLDDLPGHADLVWGSFPCQDLSLAGGGAGLRGDRSGTFWPFIAQLEELKIAGRAPT
VIAVENVVGTLTSHKGADFTAICEALDNLGYRYGAFIADASHFVPQSRPRLFVIAIEKNV
EPLKTGPEPTAPWHTAALKKAYSQLPEHLKQSWLWWHMPKPPKREMRFADVIEAKPASVK
WHTAAETRALLSMMSDVNLAKVETAKAAGVVMVGGVYKRTRYHHGIKVQRAEVRFDDVAG
CLRTPAGGSSRQLILVVDGVRIRSRLISTRETARLMGLPDSYELPQAYNEAYHLTGDGVA
VPVVRYIAKHILEPVVKGARASMPPAKAPTAKAT
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
ttgcccgtcagcaatacagggaatccaatgtttaaattctacgaattttttgctggcgga
ggtatggcgcgagccggactgggcgaaggctggaaatgcgagttcgccaacgacttcgac
cggaagaagggcgcaacttacaagaagaactggggcgacggcgagatgatcgtggacgac
atccgcaacattggtctcgatgatcttccgggacacgctgacctcgtgtggggttccttc
ccctgccaagacctttctctagcgggtggtggggcggggttacgcggcgaccgctcgggg
accttctggcctttcattgcacaactcgaagaactgaagatagccggacgtgccccaacc
gtgattgcagttgagaatgttgttggaactctgacctcacataagggtgcggatttcacc
gccatctgcgaagcgctggacaacctcggctatcggtatggcgctttcatcgccgacgcc
tcacatttcgttccgcaatcccggccaaggctatttgtgatcgctatcgagaagaacgtg
gaaccgttgaaaacgggtccggagccaacggcaccgtggcacacggccgcgttgaagaaa
gcgtatagccaactcccggaacatctaaagcagtcttggctatggtggcatatgccgaag
cctccaaagcgcgagatgcgtttcgctgatgtaatcgaggcaaaacccgcatcagtgaaa
tggcatacagcggctgaaacgcgggcgctgttgtccatgatgagcgatgtgaatctcgcc
aaagtcgaaaccgctaaggctgctggtgtggttatggttggtggtgtctacaaacgcacg
cgctatcaccacggcatcaaggttcaacgcgcggaagtgcgctttgatgacgttgcaggg
tgcctaagaacacccgcaggcgggtcgtctcgccagctcattcttgtggtggatggcgtg
cgtatccgttcacggctgatctccacacgtgagacggcccgcttgatgggcttacccgac
agctacgagctgccacaggcatataacgaagcctatcatttgactggtgatggcgttgct
gttccagttgtgcgatacattgcaaaacacattttggaaccggtggttaagggcgcgcgc
gcctcaatgccaccagcaaaggcgcccacagcgaaggcaacatga
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