Rhizorhabdus dicambivorans: CMV14_00500
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Entry
CMV14_00500 CDS
T05084
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
rdi
Rhizorhabdus dicambivorans
Pathway
rdi03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rdi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CMV14_00500
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rdi03400
]
CMV14_00500
Enzymes [BR:
rdi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
CMV14_00500
DNA repair and recombination proteins [BR:
rdi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CMV14_00500
Prokaryotic type
CMV14_00500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Tcell_CD4_C
Motif
Other DBs
NCBI-ProteinID:
ATE63063
UniProt:
A0A2A4FYE8
LinkDB
All DBs
Position
109677..110387
Genome browser
AA seq
236 aa
AA seq
DB search
MAGDIKLHDSWRGPLKAEFDAPYMAQLRQYLMEQRGQGKRIFPAASEWFRALDLTPLDRV
RVVILGQDPYHGLGQAHGLCFSVRPGVRPPPSLVNIYKELHSDLGIERPAHGFLEHWARQ
GVLLLNSVLTVEMGLAASHRDRGWETFTDAIIRLVNAKADPVVFLLWGSYAQKKAAFVDS
TDRGGRHLVLKAPHPSPLSAHSGWFGCRHFSKANAFLEANGLAPIDWSLPAVEAVA
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atggcgggtgacatcaaacttcacgacagctggcgcggacccctgaaggccgagttcgac
gccccctatatggcgcagctccgccaatatctgatggagcagcgcggacagggaaagcgc
atcttcccggccgccagcgaatggttccgcgcgctcgacctcaccccgctcgacagggtc
cgcgtcgtcatcctggggcaggacccctatcacggcctcggccaggcgcatgggctgtgc
ttcagcgtccgccccggcgtgcggccgccgccgagcctggtcaacatctacaaggaactg
cacagcgacctcggcatcgagcggcctgcccatggcttcctcgagcattgggcccgccag
ggcgtgctgctgctcaattcggtgctgaccgtcgagatggggctggcggcgtcgcaccgc
gaccggggctgggagaccttcaccgacgcgatcatccggcttgtcaacgccaaggccgat
ccggtcgtgttcctactgtggggcagctatgcccagaagaaggcggcgttcgtcgattcc
accgacaggggcggccgccacctcgtcctcaaggcgccccatccctcgcccctgtcggcg
catagcggctggttcggctgccgccatttctccaaggccaatgcctttctcgaagcgaac
ggcctggcgccgatcgactggtcgctgccggcggtcgaggccgtggcctga
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