Rhizorhabdus dicambivorans: CMV14_00550
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Entry
CMV14_00550 CDS
T05084
Name
(GenBank) phosphomethylpyrimidine synthase ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
rdi
Rhizorhabdus dicambivorans
Pathway
rdi00730
Thiamine metabolism
rdi01100
Metabolic pathways
rdi01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
rdi00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
CMV14_00550
Enzymes [BR:
rdi01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
CMV14_00550
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
ATE63072
UniProt:
A0A2A4G0G2
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All DBs
Position
complement(115662..117521)
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AA seq
619 aa
AA seq
DB search
MADIPARTEMKVTTGPIRGSRKIHVEGPGGIRVAMREIALEPTANEPPVRVYDCSGPYTD
DKANIDIMAGLPALRRDWIVARGDVEEYDGRAVKPEDNGLKGPDRAGGVAPFPNVVKRPL
RAKAGQNVSQMHYARRGIITPEMEYVAIRENVGRAALKEKLLRDGEDFGASIPDYVTPEF
VRDEVARGRAIIPSNINHPESEPMAIGRNFLVKINANIGNSAVASDVASEVDKMVWSIRW
GADTVMDLSTGRNIHDIREWILRNSPVPIGTVPIYQALEKVNGVAEDLTWEIFRDTLIEQ
AEQGVDYFTIHAGVRLPFIPLTASRVTGIVSRGGSIMAKWCLAHHRESFLYERFEEICEI
MKAYDVAFSLGDGLRPGSIADANDAAQFAELKTLGELTQIAWKHDVQVMIEGPGHVPMHK
IKANMDKQLEACGEAPFYTLGPLTTDIAPGYDHITSAIGAAMIGWFGTAMLCYVTPKEHL
GLPDRDDVKVGVVTYKLAAHAADLAKGHPAAKLRDDALSRARFEFRWRDQFNLSLDPDTA
EQYHDQTLPAEGAKTAHFCSMCGPKFCSMKITQEVRDFAATKNAPADQFIAAGEAEAGMR
AMSDVFKEKGGEIYLPAAE
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atggccgatatccccgcgcgcaccgaaatgaaggtgaccaccggaccgatccggggatcg
cgcaagatccatgtcgaggggccgggcggcatccgcgtcgcgatgcgcgagatcgcgctg
gagccgaccgccaacgaacccccggtccgcgtctatgactgctccggcccttataccgac
gacaaggcgaacatcgacatcatggcgggcctccccgcgctccgccgcgactggatcgtc
gcgcgcggcgatgtcgaggaatatgacggccgcgccgtgaagcccgaggataatggcctg
aagggccccgatcgggccggcggcgtcgcgcctttccccaacgtcgtgaagcggcccttg
cgcgcgaaggccggccagaacgtcagccagatgcactatgcccggcgcggcatcatcacc
cccgagatggaatatgtcgcgatccgcgagaatgtcggccgcgccgcgctgaaggagaag
ctgctccgcgacggtgaggatttcggcgcctcgatccccgattatgtcacgccggagttc
gtccgcgacgaggtcgcgcgcggccgcgcgatcatcccgtcgaacatcaatcaccccgaa
agcgagccgatggcgatcggccgcaacttcctggtgaagatcaacgccaatatcggcaat
tcggcagtcgcctccgacgttgccagcgaagtcgacaagatggtctggtcgatccgctgg
ggcgccgacacggtgatggacctgtcgaccggccgcaacatccacgatatccgcgaatgg
atcctccgcaactcgcccgtgccgatcggcaccgtgccgatctatcaggcgctggaaaag
gtgaacggcgtcgccgaggacctgacctgggaaatcttccgcgacacgctgatcgagcag
gccgaacagggcgtcgactatttcaccatccatgccggcgtgcgcctgcctttcatcccg
ctcaccgccagccgcgtcaccggcatcgtcagccgcggcggatcgatcatggcgaaatgg
tgcctggcgcaccacagggagagtttcctctacgagcggttcgaggagatctgcgagatc
atgaaggcctatgacgtggccttctcgctgggcgatggtctccgccccggctcgatcgcc
gacgccaacgacgccgcccagttcgccgaactcaagacgctgggcgaactcacccagatt
gcctggaagcatgacgtgcaggtgatgatcgaaggccccggccatgtgccgatgcacaag
atcaaagcgaatatggacaagcagctggaggcgtgcggcgaagcccccttctacacgctc
gggccgctgaccaccgatatcgcgcccggttacgatcacatcaccagcgcaatcggcgcg
gcgatgatcggctggttcggcaccgcgatgctctgctacgtcacgccgaaggagcatctc
ggcctgcccgaccgcgacgatgtgaaggtcggggtcgtaacctacaagctcgccgcccac
gccgccgacctggcgaaaggccacccggccgccaaactccgcgacgacgcgctcagccgc
gcccgcttcgagttccgctggcgcgaccaattcaacctgtcgctcgatcccgacacggcc
gagcagtatcacgaccagaccctgccggccgagggtgccaagaccgcgcatttctgctcg
atgtgcggcccgaaattctgctcgatgaaaattacccaagaggtgcgggacttcgcggcg
accaagaacgcgcccgccgatcagttcatcgcagccggcgaagccgaagccggcatgcgc
gcgatgagcgacgtgttcaaggagaagggcggggagatttatctgccggcggcggagtga
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