KEGG   Rhizorhabdus dicambivorans: CMV14_02050
Entry
CMV14_02050       CDS       T05084                                 
Name
(GenBank) DNA ligase-associated DEXH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
rdi  Rhizorhabdus dicambivorans
Brite
KEGG Orthology (KO) [BR:rdi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rdi03400]
    CMV14_02050
Enzymes [BR:rdi01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     CMV14_02050
    5.6.2.6  RNA 3'-5' helicase
     CMV14_02050
DNA repair and recombination proteins [BR:rdi03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    CMV14_02050
SSDB
Motif
Pfam: DEAD_assoc WH_Lhr DEAD Helicase_C ResIII Cas3-like_C_2
Other DBs
NCBI-ProteinID: ATE63332
UniProt: A0A2A4G0L8
LinkDB
Position
complement(438484..440892)
AA seq 802 aa
MANLPTPLTDWFAARGWAPRRHQLEMLAAARAGRDALLVAPTGSGKTLAGFLPTLVELIE
AGGGKGLHTLYVSPLKALAVDVQRNLLTPIAEMGLDIRVETRTGDTPSDRKARQRVKPPQ
ILLTTPESLSLLLSYPDSAALFAGLRTVVIDEVHAFATTKRGDLLALSLARLESLAPEMR
RVALSATVADVDAYRGWLSGDGDYESVALVQGERGAEPRVDILIPEGRIPWAGHSGRYAA
EQVMAEIETHKTTIIFCNTRSLAELIFQDLWKVNAMGLPIGIHHGSLSKEARRKVEAAMA
EGRLRALVATASLDLGVDWGDVDLVIQMGAPKGASRLLQRLGRANHRLDEVSEAVIVPGN
RFEYLEGRAAIDAIEADELDNEPFRPGSIDVLAQHVMAIACAGPFEAGDMLAEVRRAAPY
ATLTPEQFDRVLNYIANGGYALKAYEKYRRLTRDPDGRWRISHPQFAAQHRLNAGIIVEA
PMLDVRFRNGRSLGKVEEGFGVTLAPGDCFFFMGMALEVQKIDLTDLIVRATTKPARIPT
YGGARMPISTHLAERVRRYLHDPSEWPRFPDDVRDWLEMQARRSRLPAPDELLVETFQHE
KRHYMVIYSFEGWNAHQSLGMLLTRRMESMGLSPLGFVASDYAIACYSIHPVTDPASLFS
ATILEDEFVDWVERSALLKRAFREVAVIGGLVERQHPGKKKSGRQVTFSTDLIYDVLRRY
EPDHLLLDAAWADARAKMTDVGRLGALIERAAERIVHVKLDRVSPLAVPVLVLIGRETVA
QGLADDALLIEADELAKVAMEE
NT seq 2409 nt   +upstreamnt  +downstreamnt
gtggccaacctccccacccccctcaccgactggttcgccgcccggggctgggcgccgcgc
cggcatcagctggagatgcttgccgccgcgcgggcggggcgcgatgcgttgctcgtcgcg
ccgaccggctccggcaagacgctggccggtttcctccccacgctcgtcgagctgatcgag
gcgggcggcgggaaaggcctccacaccctctatgtatcgccgcttaaggcgctcgcggtc
gacgtgcagcgcaacctgctgaccccgatcgcggagatgggcctcgacataagggtcgag
acccgcaccggcgacacgccctccgatcgcaaggcgcggcagcgggtcaagccgccgcag
atccttctcaccactcccgaatcgctgagcctgctgctgtcctatcccgacagcgcggcg
ctgttcgccggccttaggacggtggtgatcgacgaggtccatgccttcgccaccaccaag
cgcggcgacctgctcgccctttcgctcgcccggctggaaagtctggccccggagatgcgc
cgggtggcgctgtcggcgacggtcgccgatgtcgatgcctatcgcggctggctgtcgggc
gatggcgactatgaatcggtggcgttggtgcagggcgaacgcggcgccgagccccgggtc
gatatcctgatcccggaagggcgcatcccctgggccggccattcggggcgctatgccgcc
gagcaggtgatggccgagatcgagacccacaagaccacgatcatcttctgcaacacccgc
agcctcgccgaactgatcttccaggacctgtggaaggtcaacgcgatgggcctgccgatc
ggcatccaccatggctcactgagcaaggaggcgcgccgcaaggtcgaggcggcgatggcc
gaggggcggctgcgcgcactggtcgccaccgccagcctcgatctcggcgtcgattggggc
gatgtcgatctcgtcatccagatgggcgcgcccaagggggcgtcgcgcctgctccagcgt
ctcggccgcgccaatcaccggctcgacgaggtgagcgaggcggtgatcgttcccggcaac
cgcttcgaatatctcgaagggcgcgccgcgatcgacgcgatcgaggcggacgagctcgac
aatgagccgttccggccgggcagcatcgacgtgctcgcccagcatgtgatggcgatcgcc
tgcgccggcccgttcgaagccggggacatgcttgccgaggtccggcgcgcggcgccctat
gcgacgcttacgcccgagcagttcgaccgggtgctgaactatatcgccaatggcggctat
gcgctgaaggcctacgagaaatatcgccggctgacccgcgatccggacggccgctggcgg
atcagccatccccagttcgccgcccagcatcgcctgaacgccggcatcatcgtcgaggcg
ccgatgctcgacgtgcgcttcaggaacggccgcagcctcggcaaggtcgaggaggggttc
ggcgtcaccctggcacccggcgactgcttcttcttcatggggatggcgctggaggtccag
aagatcgacctgaccgacctgatcgtccgcgccaccaccaagcccgcgcgcatccccacc
tatggcggcgcgcgcatgccgatctcgacccatctggccgagcgggtgcgccgctatctc
cacgacccgtccgaatggccgcgcttccccgacgatgtccgcgactggctggagatgcag
gcccgccgatcgcgcctgcctgcccccgacgagttgctggtcgagaccttccagcacgag
aagcgccattatatggtgatatacagcttcgaaggctggaacgcgcaccagtcgctcggc
atgctgctgacccggcggatggagagcatggggctgtcgccgctgggcttcgtggcgagc
gactatgcgatcgcctgctattcgatccaccccgtcaccgatcccgccagcctgttctcc
gcgacgatattggaagacgagttcgtcgactgggtcgagcggtcggcgctgctcaagcgc
gccttccgcgaggtggcggtgatcggcgggctcgtcgagcgccagcaccccggcaagaag
aagtcgggccgccaggtcaccttctcgaccgacctgatctatgacgtgctgcgccgctac
gagcccgatcatctgctgctcgacgccgcctgggccgatgcgcgggcgaagatgaccgac
gtcgggcgattgggcgctctgatcgagcgcgcggcggagcgcatcgtccacgtgaagctc
gaccgcgtctccccgctggcggtgcccgtgctggtgctgatcggccgcgagacggtggcg
caggggctggccgacgacgcgctgctgatcgaggccgacgaactggcgaaggtggcgatg
gaggagtga

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