Rhizorhabdus dicambivorans: CMV14_02350
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Entry
CMV14_02350 CDS
T05084
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
rdi
Rhizorhabdus dicambivorans
Brite
KEGG Orthology (KO) [BR:
rdi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rdi03016
]
CMV14_02350
Enzymes [BR:
rdi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
CMV14_02350
Transfer RNA biogenesis [BR:
rdi03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
CMV14_02350
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
ATE67089
UniProt:
A0A2A4G1W7
LinkDB
All DBs
Position
488790..489407
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AA seq
205 aa
AA seq
DB search
MTVYLHQEDLPEGALGPGPVAVDTETMGLITPRDRLCLVQISDGGGDEHLVRFMPGSDYA
CPNLRAVLADPNRLKLYHFARFDLAAIKHYIGVNAAPVYCTKTASRLIRTYTDRHGLKEL
VRELLGQEVSKQQQSSDWGAADLSEAQKEYAASDVRYLHAMRAILDERLAREGRTALAQA
CFDFLPARAELDLAGWPEIDIFAHV
NT seq
618 nt
NT seq
+upstream
nt +downstream
nt
atgacagtctatttgcatcaggaagacctgcccgagggcgcgctcggcccgggcccggtc
gcggtcgataccgagacgatggggctgatcaccccgcgcgaccggctctgcctcgtccag
atctcggacggcggcggcgacgaacatctcgtccgcttcatgccgggcagcgactatgcc
tgcccgaatctgcgcgcggtgctggccgatccgaaccgtctgaagctctatcatttcgcg
cgcttcgaccttgccgcgatcaagcattatatcggggtgaacgccgccccggtctattgc
accaagaccgcgtcgcggctgatccgcacctataccgatcgtcacggcctgaaggagctg
gtccgcgagctgctcggccaggaggtgtcgaagcagcagcagtcgtccgactggggcgcc
gccgacctgagcgaggcgcaaaaggaatatgccgcctccgacgtgcgctacctgcacgcg
atgcgcgccatcctcgacgagcggctggcccgcgaggggcgcactgctctggcccaggcc
tgtttcgacttcctccccgcccgtgccgagctcgacctcgccggctggccggagatcgac
atcttcgcgcatgtgtga
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