Rhizorhabdus dicambivorans: CMV14_02515
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Entry
CMV14_02515 CDS
T05084
Symbol
addB
Name
(GenBank) double-strand break repair protein AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
rdi
Rhizorhabdus dicambivorans
Brite
KEGG Orthology (KO) [BR:
rdi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rdi03400
]
CMV14_02515 (addB)
Enzymes [BR:
rdi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CMV14_02515 (addB)
DNA repair and recombination proteins [BR:
rdi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
CMV14_02515 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
ATE63412
UniProt:
A0A2A4G0U7
LinkDB
All DBs
Position
522333..525416
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AA seq
1027 aa
AA seq
DB search
MTTPAVFTIPAHRAFADALAAGLIAQYGPDPLALARTAILVPNNRAARAISDAFVRRAEG
GLLLPRLVAIGDPELDERLGGLLDPIAGEDEAPIPPAIDPLERQMILARLTSEARAAAGA
PVDGGEAIRLAGELGRTLDQLLIELVPPARLKDLVDLPDLSDHWQRSLDMLEAILTRWPA
ELEKRGRIDLADRRNRLLDRVAKRWRGDPPPGPVIAAGIASTTPAVAALLAIVARLPRGM
VVLPGIDTISAREEWDALGPHEPRDAEERAPRPIESHPQFALKRLLDRMGVGREEVQTWR
WGGGRDARSVRARAIANAMAPAAFTDKWHKLPPAERRLTGVRAIELANPADEAQTIALAL
REAIETPGRTAALVTPDRVLARRVAAHLARWGIVADDSAGTPLSLTPAGTLLLAIAEAAA
EGFAPVALLGLVKHPLVRRGEERGAWLDGVRRLDIALRGPRPPAGLDGVAAFLRDGEGVV
KAKRARAIGWWEAVRPLLGPLQAAFAPLPFRGGAGGGASPQTHRREEDRPHSNPSPEGAG
LSSLLAAVREAATSLAGDAAWSGPDGRAAADLIAELEATAPLGPAGFDPASLAPTLRLLM
DAQAVRPPQGGHPRLSIWGLLEARLQHADLMVLGGLNEGVWPPLPSPDPWLAPRIRAELG
LVGLEARIGLSAHDFAMALGAPRVIVTRARRDARSPTIASRFWLRLEAMTGGITREHRLP
HWAAAIDRPAGPPEPAGRPRPAPPVADRPSIIAVTKLDRLKADPFAFYADAMLKLWSLDP
VDADPTPAWRGTAVHAVFERWMKEDACDPERLIPRARVLLDEMAAHPVMRALWEPRLMAA
LEWIADAMRALKAEGRHALVAEVKGEVDVAGIRLKGTVDRIDRRGDGRIAIIDYKTGMPP
SAAAVAEGYSMQLGLLGLIAERGGFDGVDGVPVDFEYWSLARNRENGFGYVSRPVGGKDG
IDPERFTALAAETLGRAVRKWLTGPAPFTAKLAPEYAPYGDYDQLMRLDEWYGRDMALLP
GEAEEPA
NT seq
3084 nt
NT seq
+upstream
nt +downstream
nt
atgaccacccccgccgtcttcaccattcccgcgcaccgcgccttcgccgatgcgctggcg
gcggggctgatcgcccaatatggccccgatccgctggcgctggcgcgcaccgcgatcctg
gtgcccaacaaccgcgcggcgcgcgcgatcagcgatgccttcgtgcggcgggccgagggc
ggattgctgctgccccggctcgtcgcgatcggcgatcccgagctggacgagcggctgggc
ggcctgctcgatccgatcgccggcgaggacgaggcaccgatcccgcccgcgatcgacccg
ctcgaacggcagatgatcctcgcccggctgacgtcggaggcgcgcgccgccgccggggcg
ccggtcgacggcggcgaggcgatccggctggccggcgaactcggccgcaccctcgatcag
ctgctgatcgaactggtgccacctgcgcggctcaaggatctggtcgacctgcccgacctc
tccgaccattggcagcgctcgctcgacatgctcgaagcgatcctgacccgctggccggcc
gagctggagaagcgcggccggatcgacctggccgaccggcgcaaccgcctgctcgatcgc
gtggcgaagcgctggcgcggcgatccgccgcccggcccggtcatcgccgccggcatcgcc
agcaccacccccgccgtcgcggcgctgctcgccatcgtcgcccggctgccgcgcgggatg
gtcgtcctccccggcatcgacacgatctcggcgcgtgaagagtgggacgcgctgggcccg
cacgaaccccgcgacgccgaggagcgcgcgccgcgcccgatcgagagccaccctcagttc
gcgctcaagcggctgctcgaccggatgggagtcggccgcgaggaggtccagacctggcgc
tggggcggcggccgtgacgcgcgatcggtccgcgcccgggcaatcgccaatgccatggcg
cccgccgccttcaccgacaaatggcacaagctgcccccggccgaacgccgcctgaccggc
gtgcgcgcgatcgaactggctaaccccgccgacgaggcgcagacgatcgcgctggcactg
cgcgaggcgatcgagacgccgggccgcactgccgcgctcgtcacgcccgatcgggtgctg
gcccgccgcgtcgccgcgcacctcgcccgctgggggatcgtcgccgacgattcggcgggc
accccgctgtcgctgaccccggcgggcaccctgctgctcgccatcgccgaggcggcggcg
gagggcttcgcgccggtcgcgctgctcgggctggtcaagcatccgctggtgcggcggggc
gaggaacgcggcgcctggctcgatggcgtccgccggctcgatatcgccttgcgcggcccc
cgcccgcccgccgggcttgacggcgtcgccgccttcctgcgcgacggcgagggcgtggtg
aaggcgaagcgcgcgcgggcgatcggctggtgggaagcggtgaggccgctgctggggccg
ttgcaagccgcttttgcacccctccccttcaggggaggggctgggggtggggcctctcca
caaacacaccgccgcgaggaggacaggccccattccaacccctcccctgaaggggcgggg
ctctcatccctcctcgccgccgttcgcgaggccgcgacatcgctggcgggcgatgccgcc
tggtcgggccccgatggccgcgccgccgccgatctgatcgccgagctggaggcgaccgcg
ccgctcggccccgccggtttcgatcccgcgagcctcgcccccacattgcgcctgctgatg
gatgcgcaggcggtgcgtccgccgcagggcggccatccccgcctgtcgatctggggcctg
ctcgaagcgcggctgcagcatgccgatctgatggtgctgggcgggctcaacgaaggggtg
tggccgccgctgcccagccccgatccctggctcgccccgcgcatccgcgccgaactgggg
ctggtcgggctggaggcgcggatcggcctgtccgcgcatgatttcgccatggcattgggg
gcgccgcgggtgatcgtcacccgcgcccggcgcgacgcgcgctcgccgaccatcgcctcg
cgcttctggctgcggctggaggcgatgaccggcggcatcacccgcgagcatcgcctgccc
cattgggcggcggcgatcgatcggcccgccggcccgcccgaacccgccggccggccgcgc
cccgcgccgccggtcgccgatcgcccgtcgatcatcgccgtcaccaagctcgaccggctg
aaggccgatcccttcgccttctatgccgatgcgatgctgaaactgtggtcgctcgatccg
gtcgacgccgatcccacccccgcctggcgcggcaccgccgtccatgcggtgttcgagcgc
tggatgaaggaggacgcctgcgatcccgagcggctgatcccccgcgcgcgcgtcctgctc
gacgagatggcggcgcacccggtgatgcgcgccctgtgggagccccggctgatggcggcg
ctggaatggatcgccgatgcgatgcgcgcgctgaaggcggaagggcgccacgcgctggtc
gccgaagtgaagggtgaggtcgacgtcgccggcatccggctgaagggcacggtggaccgg
atcgaccggcgcggcgacggccggatcgcgatcatcgactacaagaccggcatgccgccc
agcgcggcggcggtggcggagggctattcgatgcagctcggcctgctcggcctgatcgcc
gagcgcggcggcttcgacggggtcgacggcgtgccggtcgacttcgaatattggtcgctc
gcgcgcaaccgagagaatggcttcggctatgtctcgcgcccggtgggcggcaaggacggg
atcgatcccgaacgcttcaccgcgctcgccgccgagacgctgggccgggcggtgcgcaaa
tggctgaccggcccggctcccttcaccgccaagctggcccccgaatatgcgccttatggc
gattatgaccagttgatgcggctcgatgaatggtatgggcgcgacatggccctgctgccc
ggcgaggcggaggaaccggcatga
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