Rhizorhabdus dicambivorans: CMV14_04915
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Entry
CMV14_04915 CDS
T05084
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
rdi
Rhizorhabdus dicambivorans
Pathway
rdi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rdi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CMV14_04915 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rdi03019
]
CMV14_04915 (recQ)
03400 DNA repair and recombination proteins [BR:
rdi03400
]
CMV14_04915 (recQ)
Enzymes [BR:
rdi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CMV14_04915 (recQ)
Messenger RNA biogenesis [BR:
rdi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CMV14_04915 (recQ)
DNA repair and recombination proteins [BR:
rdi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CMV14_04915 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
HRDC
RQC
RecQ_Zn_bind
Helicase_C
ResIII
HHH
Motif
Other DBs
NCBI-ProteinID:
ATE63812
UniProt:
A0A2A4FRX5
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All DBs
Position
complement(1019547..1021313)
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AA seq
588 aa
AA seq
DB search
MPTPLEALHETFGFSQFRGRQQDVIDRVMAGCNTLAVMPTGAGKSLTYQIPALCREGTGL
VISPLIALMHDQVRSAEAAGIRAAALTSADDNRFETMDRLRAGQLDLLYVAPERVSTEGF
RRLIDQTPLALIAIDEAHCVSEWGHDFRPDYRLLRGLLEERPEVPRLALTATADHHTRED
ILAQLGIEPDGLILAGFDRENLRYGITTRDGVAKQLMALLDDNPGSGIVYAPTRDATEKL
AAQLGAGGRPTRAYHAGLDPQIRAANQRAFVASEDMVMVATVAFGMGIDKPDVRFVAHAG
LPKSIEAYYQETGRAGRDGEPAVTQLFWGADDFARARRRIETDVEEGRRPGERQRLNAMA
MLVEAPGCRRAILLRHFGETPPPACGNCDNCLNPPTGIDGTVVAQKLLSAAFRTEMRYGV
THLTDVLAGRETERVLMLGHNRLSVFGIADEAELKLIKPVARALLARDALRADDYGGLSF
GPGARPILKGEERLPLVLPPERARRRKGKERVDYPHDPLFDALRTLRRDLARAQGVPPYV
VFNDATLREMATIRPDSLAGLAQVSGVGAKKLETYGEDFLAAIRAFED
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atgcccacccccctggaagccctgcacgaaaccttcggattttcgcagttccggggacgg
caacaggatgtgatcgaccgggtgatggcggggtgcaacacactggcggtgatgccgacc
ggcgcgggcaagtcgctgacctaccagatcccggcgctctgccgcgagggcaccggcctt
gtcatctcgccgctgatcgcgctgatgcacgatcaggtccgttcggccgaagcggcgggc
atccgcgccgccgcgctgacctccgccgatgacaaccgcttcgagacgatggaccggctg
cgtgccggccagctcgacctgctctatgtcgcgcccgagcgggtctcgaccgagggtttc
cgccggctgatcgaccagaccccgctcgcgctgatcgcgatcgacgaggcgcattgtgtc
tccgaatggggccatgatttccgccccgactaccggctgctgcgcggcctgctggaggaa
cggcccgaggtcccccgcctcgcgctcaccgccaccgccgaccaccacacccgcgaagac
atcctcgcccagctcggcatcgagcccgacgggctgatcctggccggcttcgatcgggag
aatctacgctacggcatcaccacgcgcgatggggtggcgaagcagctgatggcgctgctc
gacgacaatcccggatcgggcatcgtctacgcccccacccgcgacgcgaccgagaagctt
gctgcgcagctcggcgccggcggccggccgacgcgtgcctatcacgccgggctcgatccc
cagatccgcgccgccaaccagagggccttcgtcgccagcgaggatatggtgatggtggcg
acggtcgccttcggcatggggatcgacaagcccgacgtccgcttcgtcgcccatgccggc
ctgcccaagtcgatcgaggcctattatcaggagaccggccgcgccgggcgcgatggcgag
cccgccgtcacccagcttttctggggcgccgacgacttcgcccgtgcccgccggcggatc
gaaaccgatgtcgaagaaggccgccgccccggcgagcgccagcggctgaacgccatggcg
atgctggtcgaggcaccgggctgccgccgcgcgatcctgctccgccacttcggcgagacg
cccccgcccgcctgcggcaattgcgacaattgcctgaacccgccgaccggcatcgacggc
acggtcgtcgcgcagaaactgctctcggccgccttccggaccgagatgcgttatggcgtc
acccatctcaccgacgtgctggccggccgcgagaccgagcgcgtgctgatgctggggcac
aatcggctttccgtgttcggcatcgccgacgaggccgaactcaagctgatcaagcccgtg
gcccgcgccctgctcgcgcgcgacgcactgcgcgccgacgattatggcgggctgagcttc
ggtcccggcgcgcggccgatcctgaagggcgaggaacggctgccgctcgtgctgccgccc
gaacgcgcgcggcggcgcaagggcaaggagcgggtcgactatccgcacgacccactgttc
gacgcgctgcgcaccctgcgccgcgaccttgcccgcgcgcagggcgtgccgccctatgtg
gtgtttaacgacgccaccttgcgcgaaatggcgacgatcaggcccgacagcctggctggc
ctcgcacaggtttcgggcgtaggggccaagaagctggaaacctatggcgaagatttcctt
gccgccattcgcgcctttgaagactga
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