KEGG   Rhizorhabdus dicambivorans: CMV14_05015
Entry
CMV14_05015       CDS       T05084                                 
Name
(GenBank) dicarboxylate--CoA ligase PimA
  KO
K01897  long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
Organism
rdi  Rhizorhabdus dicambivorans
Pathway
rdi00061  Fatty acid biosynthesis
rdi00071  Fatty acid degradation
rdi01100  Metabolic pathways
rdi01212  Fatty acid metabolism
rdi02024  Quorum sensing
rdi04146  Peroxisome
Module
rdi_M00086  beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:rdi00001]
 09100 Metabolism
  09103 Lipid metabolism
   00061 Fatty acid biosynthesis
    CMV14_05015
   00071 Fatty acid degradation
    CMV14_05015
 09140 Cellular Processes
  09141 Transport and catabolism
   04146 Peroxisome
    CMV14_05015
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    CMV14_05015
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01004 Lipid biosynthesis proteins [BR:rdi01004]
    CMV14_05015
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:rdi04147]
    CMV14_05015
Enzymes [BR:rdi01000]
 6. Ligases
  6.2  Forming carbon-sulfur bonds
   6.2.1  Acid-thiol ligases
    6.2.1.3  long-chain-fatty-acid---CoA ligase
     CMV14_05015
Lipid biosynthesis proteins [BR:rdi01004]
 Acyl-CoA ligase
  Long/very long chain acyl-CoA ligase
   CMV14_05015
Exosome [BR:rdi04147]
 Exosomal proteins
  Exosomal proteins of breast milk
   CMV14_05015
  Exosomal proteins of breast cancer cells
   CMV14_05015
SSDB
Motif
Pfam: AMP-binding AMP-binding_C
Other DBs
NCBI-ProteinID: ATE63831
UniProt: A0A2A4FSJ7
LinkDB
Position
complement(1041386..1042954)
AA seq 522 aa
MTTTRSIEGSDELADFRPGSLVDMLQDTVARYGDRIWLTYGPLHWTFAESAAVIDTLATE
FSALGVSRGDRVALLMPNHPGFVWSYYAALRLGATVVALNPLYAQDRLDGQLRETLPRLI
VGVRIDGEAERTAALASGNGIAAHLWPWDGPELEKRAAALATGRDDAPAAEIMPDETLAV
LQGTGGTTGLPKFAMLTHANLRWNVEQTAAVFPKLENGAECLLVPVPFCHITGMTMAMNL
AVRLAAETILLPRFNPEAIFELLRDRPVSMLAGVPTIFTALLRDPRSAGVDWSRIKYAAA
GGAPAAAETIQRFHTLSGVYIRQCYGLSETSPLVTLMPGQADEPLGAAGLPIPGTRVTID
GADECGEILVAGPQVMQGYWQRPEESEHALQAGMLRTGDIGRIDEAGFLHIVDRQKEVII
ASGYNVYPRLVEDAIVTHPAVIEAAVIGIPDAYRGETVRAYAVLRQDTTLTLAELQAHLV
TRLSPFEIPKQFEIRQDLPRTPVGKPSRAALREEWAAARSSD
NT seq 1569 nt   +upstreamnt  +downstreamnt
atgaccacgacccgttccatagagggatcggacgagctcgcggacttccgtcccggcagt
ctggtcgacatgcttcaggacacggttgcccgctacggtgatcgcatctggctgacctat
ggcccgctgcactggaccttcgccgaaagcgcggcggtgatcgacacgctcgccacagag
ttcagcgcgctcggggtgagccggggcgatcgcgtcgcgctgctcatgcccaatcatccg
ggcttcgtctggagctattatgccgcgctcaggctcggtgcgaccgtcgtcgcgctcaat
ccgctctacgcgcaggaccgtctcgatggccagcttcgggagaccttgccgcgcctgatc
gtcggcgtccggatcgacggcgaggcagagcgtaccgcagcgctcgcaagcgggaatggc
atcgccgcccatctctggccctgggacgggccggagctcgagaagcgggccgccgcgctc
gccaccggacgggacgacgctccagcggcggagatcatgcccgacgagaccctggcggtg
ctgcaggggacgggcggcaccaccgggctacccaaattcgcgatgctcacccacgccaac
cttcggtggaatgtggagcagaccgccgccgtcttccccaagctggaaaacggcgccgaa
tgtctgctcgtgccggtacccttctgccatatcaccgggatgacgatggcgatgaacctc
gccgtgcggctcgctgcggagaccatcctcctgccccgtttcaaccccgaagcgatcttc
gagctgctgcgcgatcggcccgtatcgatgctggccggcgtgccgacgatcttcaccgcg
ctgctgcgcgatccgcgatcggccggggtcgactggtcgcgcatcaaatatgcggccgcc
ggcggcgcaccggctgcggccgagaccattcagcgcttccatacgctttccggcgtgtac
atccggcaatgctatggcctgagcgagacatccccgctggtcaccctcatgcccggacag
gctgacgagccgctgggagcggcggggctgccgataccgggcacgcgggtgacgatcgac
ggcgcggacgaatgtggcgagatactggtcgccggtccacaggtgatgcagggctattgg
cagcgcccggaagagagcgagcacgcgctgcaggccggcatgttgcgcaccggcgatatc
ggccggatcgacgaagccggcttcctgcacatcgtcgaccgccagaaggaggtcatcatc
gccagcggctacaatgtctatccacggctggtcgaagatgcgatcgtcacccacccggcg
gtcatcgaggctgcggtcatcggcattcccgacgcctatcgtggcgagacggtgcgggcc
tatgccgtactcaggcaagacacgaccctgacgctcgccgaactccaggcccatctcgtc
acccgcctgtcgccgttcgaaatacccaagcagttcgagatccggcaggatctgccgcga
acgccggtcggcaagccatcccgggccgcactgcgggaggagtgggcagccgcgaggtcg
agcgactga

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