Rhizorhabdus dicambivorans: CMV14_06355
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Entry
CMV14_06355 CDS
T05084
Name
(GenBank) pyridoxal-dependent decarboxylase, exosortase A system-associated
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
rdi
Rhizorhabdus dicambivorans
Pathway
rdi00300
Lysine biosynthesis
rdi00470
D-Amino acid metabolism
rdi01100
Metabolic pathways
rdi01110
Biosynthesis of secondary metabolites
rdi01120
Microbial metabolism in diverse environments
rdi01230
Biosynthesis of amino acids
Module
rdi_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
rdi00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
CMV14_06355
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
CMV14_06355
Enzymes [BR:
rdi01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
CMV14_06355
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
ATE64059
UniProt:
A0A2A4FW49
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All DBs
Position
1337611..1338852
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AA seq
413 aa
AA seq
DB search
MKPSGPIPADYIRRDGALMIGGRSADEWIGIAGDTPLFVYDLAIVRDRIARFRAAFPGVS
LHYAIKANPHPPLVRAMAGLVDGIDVASGGEARIALDAGMDARRISFAGPGKRDRELALA
IEEGITLNLESEGEAERALAIGRGIGRTPRLAIRVNPDFELKGSGMKMGGGAKPFGIDAD
QAAQVVRRIVDGGGDYRGLHIFAGSQALDPQALIEAQASALALAARISREADVPPPHVNL
GGGFGIPHFANDTPLDESLVGDALSAALAGRDPILADAEFTIELGRWLVGEAGVYLSRIV
DRKTSHGETFLVVDGGLHHQLAASGNFGTVVRRNYPISLTNIADSATVETVSVVGCLCTP
IDRLGDHVGLPRAEVGDVVALFLAGAYGASASPQAFLGHPPPREITVDGTGIL
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccgagcggacccatcccggccgattatatccggcgcgatggcgcgctgatgatc
ggtgggcgcagcgccgacgaatggatcggcatcgcgggcgacacgccgctgttcgtctat
gatctggccatcgtgcgcgatcggattgcgcgcttccgtgccgcctttcccggcgtgtcg
ctccattatgcgatcaaggccaatccgcatcccccgctggtccgtgccatggccggcctc
gtcgacggcatcgacgtcgcgtccggaggcgaggcgcggatagcgctcgacgccgggatg
gacgcgcggcgcatctccttcgccggcccgggcaagcgcgaccgcgaactggccctggcg
atcgaggaggggatcacgctcaacctcgaatccgaaggggaggccgaacgcgcgctggcg
atcgggcgcggtatcggccggacgccgcgcctcgccatccgcgtcaatccggatttcgag
ctgaagggctcggggatgaagatgggcggcggcgccaagcccttcggcatcgacgccgat
caggcggcgcaggtcgtccgccgcatcgtcgacggcggcggcgactatcgcggcctccac
atcttcgccggttctcaggcgctcgatccgcaggcgctgatcgaggcgcaggcttcggcg
ctggcgctggccgcgcggatcagccgcgaggcggacgtgccgccgccgcacgtcaatctc
ggcggcggcttcggcatcccgcatttcgccaatgacacgcccttagacgaaagtctggtg
ggcgacgcattatccgcggcgctcgcgggacgcgatccgatcctcgccgatgcagaattt
acaatcgaactgggccgctggctggtgggcgaggcgggggtctatctgagccggatcgtc
gaccgcaagaccagccatggcgagactttcctggtcgtcgacggcggcctgcaccaccaa
ctggcggcaagcggcaatttcggtacggtggtccgccgtaactatccgatatctttgacg
aatatcgcggattctgctacggtcgaaaccgtgtcggtggtgggctgtctctgtaccccg
atcgatcgcttgggcgaccatgtcggcctgccccgggcggaggtcggcgatgtcgtcgcg
ctgttccttgcgggggcctatggcgcgagcgcgagcccgcaggctttcctgggccacccg
cccccgcgcgaaataaccgtggacgggacaggcatcctgtga
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