KEGG   Rhizorhabdus dicambivorans: CMV14_06925
Entry
CMV14_06925       CDS       T05084                                 
Name
(GenBank) AMP-dependent synthetase
  KO
K01897  long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
Organism
rdi  Rhizorhabdus dicambivorans
Pathway
rdi00061  Fatty acid biosynthesis
rdi00071  Fatty acid degradation
rdi01100  Metabolic pathways
rdi01212  Fatty acid metabolism
rdi02024  Quorum sensing
rdi04146  Peroxisome
Module
rdi_M00086  beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:rdi00001]
 09100 Metabolism
  09103 Lipid metabolism
   00061 Fatty acid biosynthesis
    CMV14_06925
   00071 Fatty acid degradation
    CMV14_06925
 09140 Cellular Processes
  09141 Transport and catabolism
   04146 Peroxisome
    CMV14_06925
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    CMV14_06925
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01004 Lipid biosynthesis proteins [BR:rdi01004]
    CMV14_06925
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:rdi04147]
    CMV14_06925
Enzymes [BR:rdi01000]
 6. Ligases
  6.2  Forming carbon-sulfur bonds
   6.2.1  Acid-thiol ligases
    6.2.1.3  long-chain-fatty-acid---CoA ligase
     CMV14_06925
Lipid biosynthesis proteins [BR:rdi01004]
 Acyl-CoA ligase
  Long/very long chain acyl-CoA ligase
   CMV14_06925
Exosome [BR:rdi04147]
 Exosomal proteins
  Exosomal proteins of breast milk
   CMV14_06925
  Exosomal proteins of breast cancer cells
   CMV14_06925
SSDB
Motif
Pfam: AMP-binding AMP-binding_C RA_2
Other DBs
NCBI-ProteinID: ATE64157
UniProt: A0A2A4FXZ0
LinkDB
Position
1447888..1449438
AA seq 516 aa
MQPVIAGLTDHAAKLFGDRMAITMEDGVRFSFSEIDRLAGQVAAGLIGAGIDPGDRVILH
LPNCWEWIAAYHGIVRAGAVVVPVNIMLTLEELNYILSDSGASAVVMPTQRCASVLATSP
AVVVIGVGGEGGSIRFEELLDKGVASPSLRSGEELAAIAYTSGTSGRPKGVMLSNRNIFT
SLAWTAVIHDRGPDDVILSALPFSHVYGNAVMNSIFLAGSRLVAPARFDAGETLRIIAAE
QVTLLEGVPTMFYQILRHPALDGADLSSLTRCTVGGQTMAKEVMEEVAQRLGCRLLELWG
MTELAGPAVSHHPCWPEVHGSIGRPFPGVEIKIADPCGADHDVPSDSPGELMIRGPLVMK
GYWGNPAATSAAIDEDGWLATGDIARQDEKGHFYIIDRKNDMIITAGYNVYPGELERVIG
SHPQVAMVAVGSLLDPEKGELAKAYVVLRGGSSLDEAALIDHCRRYLAPYKVPRSVAFVP
DLPTTSTGKIMRRALRDLEPTLVASTPPARLPAGIA
NT seq 1551 nt   +upstreamnt  +downstreamnt
atgcagcccgtcatcgccggcctgaccgatcacgccgctaagctgttcggcgaccggatg
gctatcacgatggaagatggcgtccgtttcagcttctccgagattgaccgcctggccggt
caggtagcggccgggctgattggtgcgggcatcgatccgggggatagggtgatcctgcat
cttcctaattgctgggaatggatcgccgcctatcacggcatcgtgcgggcgggtgcggtc
gtcgtgccggtgaacatcatgctgacgcttgaagagctgaattacattctatccgattcg
ggggcgagcgcagtggttatgccgacacagcgttgtgcttcggtcctggcaacaagccca
gcggttgtggtgattggtgtcggcggcgagggtggctcgatccgtttcgaagaactgctc
gataagggtgttgcgtcaccgtcgcttcgttccggggaggagctggctgcgatagcctat
acttcgggaaccagcggccgccccaaaggcgtcatgttgagcaatcgcaatatcttcacg
agtctcgcctggaccgccgtgatccacgatcgcggcccggacgatgtcattctctcggca
ctccctttttcccatgtctacggcaatgccgtgatgaattccatatttctggcgggcagt
cgtctcgtggcgcctgcgcgattcgacgcaggcgagaccctgcggatcatcgccgcggag
caagtcactctgctcgaaggcgtgccaacgatgttttatcagattctgcggcatccggcg
ctcgacggcgccgatctctcgagcctgacgcgctgcacggtgggtggccagacgatggcg
aaagaggtcatggaagaggtcgctcagcgattgggctgtcgcctcctggagctttgggga
atgacggaactggcgggtccggccgtctcgcaccatccctgctggccggaggtgcacggg
tcgatcggtcgtccctttccaggcgtcgaaatcaagattgcggatccgtgcggtgccgat
cacgatgtgccaagcgatagtcccggtgagctcatgatacgagggcccctggtgatgaaa
ggctactggggtaatcccgccgcgacctccgctgcgatcgatgaggatggctggctcgcg
acgggcgatatagctcgccaggatgagaagggccatttttacatcatcgatcgcaagaac
gacatgatcatcactgcgggttacaacgtctatcctggtgagctggaacgcgtgatcggc
tctcatccacaggtggcgatggtcgcggtgggttcgcttcttgatcccgaaaaaggagag
ctggccaaggcttatgtcgtcttgcgcggcggctcgtcgctcgatgaagcggcgttgatc
gaccattgccggagatatctcgctccctacaaagtgcctcgctccgtcgccttcgtgccg
gacctcccaaccaccagcactggcaagatcatgcgtcgcgcgctgcgcgatctcgaaccg
actctcgtagcctcaaccccgcctgctcgattgccggctggaatcgcttga

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