Rhizorhabdus dicambivorans: CMV14_08110
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Entry
CMV14_08110 CDS
T05084
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
rdi
Rhizorhabdus dicambivorans
Pathway
rdi03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
rdi00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CMV14_08110
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rdi03021
]
CMV14_08110
03400 DNA repair and recombination proteins [BR:
rdi03400
]
CMV14_08110
Enzymes [BR:
rdi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CMV14_08110
Transcription machinery [BR:
rdi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CMV14_08110
DNA repair and recombination proteins [BR:
rdi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CMV14_08110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
DUF211
RNA_pol_L_2
TmoB
IDH
Motif
Other DBs
NCBI-ProteinID:
ATE64366
UniProt:
A0A2A4FT47
LinkDB
All DBs
Position
1685170..1686231
Genome browser
AA seq
353 aa
AA seq
DB search
MAVNAKNWQELKKPNGLEKKSGGDGKRKATFVAEPLERGFGLTLGNSLRRVLLSSLQGAA
VTSIKIENVLHEFSSLAGVREDVTDIVLNVKQIALRMQGDGPKRLQLSATGPAEVTAGMI
AATGDIEVMNSDLVICHLDDGATLNMELTADVGKGYVTAAANRPVDAPIGLIPVDSLYSP
VRQVAYKVENTRVGQELDYDKLTLTIETDGTVTPEDALAYSARILQDQLQLFVHFDDGMA
LSAPQAGAAASVQGGAEPEGDANQLNRYLLKKVDELELSVRSANCLKNDNIIYIGDLVQK
TEAEMLRTPNFGRKSLNEIKEVLASMGLRLGMEIPGWPPENIEEMAKKLEQEF
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
gtggctgtcaacgcaaagaactggcaggaactcaagaagccgaacggcctcgaaaagaag
tcgggcggcgatggcaagcgcaaggcgaccttcgtcgccgagccgctcgagcgcggcttt
ggcctgacgctgggcaactcgttgcgccgcgtgctgctgtcctcgctgcagggcgcggcc
gtcacctcgatcaagatcgagaatgtgctgcatgagttctcgagcctcgccggcgtccgc
gaggacgtcaccgatatcgtgctgaacgtcaagcagatcgccctgcggatgcagggcgac
ggtccgaagcgcctccagctttcggcgaccggcccggccgaggtcaccgcgggcatgatc
gcggcgaccggcgacatcgaggtgatgaactccgatctggtgatctgccatctcgacgat
ggcgcgacgctgaacatggaactcaccgccgacgtcggcaagggctatgtcaccgcggcg
gcgaaccgtccggtcgacgcgccgatcggcctgatcccggtcgactcgctctactcgccg
gtccgtcaggtcgcctacaaggtggagaacacccgcgtcggccaggagcttgattacgac
aagctcaccctgacgatcgagaccgacggcaccgtcaccccggaggacgcgctggcctat
tcggcgcgcatcctgcaggaccagctccagctgttcgtccatttcgacgacggtatggcg
ctgtcggccccgcaggccggtgccgccgcctcggtgcagggcggcgcggagccggaaggc
gatgccaaccagctcaaccgttacctgctcaagaaggtcgacgagctggagctcagcgtc
cgttcggccaactgcctcaagaacgacaacatcatctacatcggcgatctggtccagaag
accgaggccgagatgctgcgcacgccgaacttcggccgcaagtcgctcaacgagatcaag
gaggtcctcgcctcgatggggctgcgcctgggcatggaaatccccggctggccgcccgag
aatattgaggaaatggccaagaagctcgaacaggaattctga
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