KEGG   Rhizorhabdus dicambivorans: CMV14_08450
Entry
CMV14_08450       CDS       T05084                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
rdi  Rhizorhabdus dicambivorans
Pathway
rdi00010  Glycolysis / Gluconeogenesis
rdi00020  Citrate cycle (TCA cycle)
rdi00260  Glycine, serine and threonine metabolism
rdi00280  Valine, leucine and isoleucine degradation
rdi00310  Lysine degradation
rdi00380  Tryptophan metabolism
rdi00620  Pyruvate metabolism
rdi00630  Glyoxylate and dicarboxylate metabolism
rdi00640  Propanoate metabolism
rdi00670  One carbon pool by folate
rdi00785  Lipoic acid metabolism
rdi01100  Metabolic pathways
rdi01110  Biosynthesis of secondary metabolites
rdi01120  Microbial metabolism in diverse environments
rdi01200  Carbon metabolism
rdi01210  2-Oxocarboxylic acid metabolism
rdi01240  Biosynthesis of cofactors
Module
rdi_M00009  Citrate cycle (TCA cycle, Krebs cycle)
rdi_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
rdi_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
rdi_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:rdi00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    CMV14_08450 (lpdA)
   00020 Citrate cycle (TCA cycle)
    CMV14_08450 (lpdA)
   00620 Pyruvate metabolism
    CMV14_08450 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    CMV14_08450 (lpdA)
   00640 Propanoate metabolism
    CMV14_08450 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    CMV14_08450 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    CMV14_08450 (lpdA)
   00310 Lysine degradation
    CMV14_08450 (lpdA)
   00380 Tryptophan metabolism
    CMV14_08450 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    CMV14_08450 (lpdA)
   00670 One carbon pool by folate
    CMV14_08450 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:rdi04147]
    CMV14_08450 (lpdA)
Enzymes [BR:rdi01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     CMV14_08450 (lpdA)
Exosome [BR:rdi04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   CMV14_08450 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 FAD_oxidored GIDA FAD_binding_2 HI0933_like NAD_binding_8 AlaDh_PNT_C Thi4 FAD_binding_3 Lys_Orn_oxgnase 3HCDH_N DAO
Other DBs
NCBI-ProteinID: ATE64421
UniProt: A0A2A4FSV2
LinkDB
Position
1762051..1763442
AA seq 463 aa
MSDYDFDVIVIGAGPGGYVAAIRAAQLGLKTACAESRETLGGTCLNVGCIPSKAMLHASE
LYDEAASGKLAKLGIKATVELDLDTMHGQRRDAVKGLTGGIEYLFKKNKVEWLKGLAAFT
GKDTVEVAGKSYRAKNIVIATGSSVTPLPGVEIDEKVVVSSTGALELPKVPGHLVVIGGG
VIGLELGSVWKRLGAKVTVVEYLDQLLPGMDGEIRKEAAKIFKKQGMELKLSTKVTGVTV
KGGKATVTVEPAAGGAAETLEADAVLVSIGRRPNTEGLALERAGLTTNKRGQIEVDHDFG
TGVPGIWAIGDVVPGPMLAHKAEDEGIAVAENIAGLTGIVNHDVIPGVVYTFPEIAAVGL
TEEDAKARGEVKVGKFPMMANSRAKTNHEPDGFVKVIADAKTDRVLGVHIIASVAGTMIA
QAAQAMEFGATSEDIAYTCHAHPTHSEAIKEAAMAVTGKPIHI
NT seq 1392 nt   +upstreamnt  +downstreamnt
atgtccgactatgatttcgacgtgatcgtcatcggcgccggccccggcggctatgtcgcc
gcgatccgggccgcgcagctcggcctcaagacggcctgcgcggaaagccgcgagacgctg
ggcggcacctgcctcaacgtcggctgcatcccctccaaggcgatgctccacgcatccgag
ctctatgacgaggccgccagcggcaagctcgccaagctcggcatcaaggccacggtcgaa
ctggacctcgataccatgcacggccagcgccgcgacgcggtcaagggcctcaccggcggt
atcgaatatctgttcaagaagaacaaggtcgagtggctgaagggcctcgccgccttcacc
ggcaaggacacggtcgaggtcgcgggcaagagctatcgtgcgaagaacatcgtcatcgcc
accggctccagcgtcaccccgctgcccggcgtcgagatcgacgagaaggtcgtggtttcc
tcgaccggcgcgctggagctgcccaaggtccccggccatctggtcgtgatcggcggtggc
gtgatcgggctggaactggggtcggtgtggaagcggctcggtgcgaaggtcaccgtggtc
gaatatctcgatcagctgctccccggcatggacggcgagatccgcaaggaagccgccaag
atcttcaagaagcagggcatggagctgaagctctcgaccaaggtcaccggcgtcaccgtc
aagggcggcaaggcgaccgtcaccgtcgagcccgccgctggcggcgcggccgagacgctg
gaggccgacgcggtgctggtgtcgatcgggcgtcgcccgaacaccgagggtctcgcactg
gagcgcgccggcctcaccaccaacaagcgcggccagatcgaggtcgatcacgacttcggc
accggcgttcccggcatctgggcgatcggcgatgtcgtccccggcccgatgcttgcccac
aaggccgaggatgagggcatcgcggtggcggagaatatcgccggtctcaccggcatcgtg
aaccacgatgtcattcccggcgtcgtctacaccttccccgagatcgccgccgtcggcctg
accgaggaggacgcgaaggcgcgcggagaggtgaaggtcggcaaattcccgatgatggcg
aacagccgcgccaagaccaatcatgagcccgatggcttcgtgaaggtgatcgccgacgcc
aagaccgacagggtgctgggcgtccacatcatcgcgtcggtcgccggcacgatgatcgcc
caggctgcgcaggccatggagttcggcgcgaccagcgaggacatcgcctatacctgccac
gcccatccgacccattcggaggcgatcaaggaagccgcgatggcggtgaccggcaagccg
atccacatctga

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