Rhizorhabdus dicambivorans: CMV14_08980
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Entry
CMV14_08980 CDS
T05084
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
rdi
Rhizorhabdus dicambivorans
Pathway
rdi03420
Nucleotide excision repair
rdi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rdi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CMV14_08980
03430 Mismatch repair
CMV14_08980
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rdi03400
]
CMV14_08980
Enzymes [BR:
rdi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CMV14_08980
DNA repair and recombination proteins [BR:
rdi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CMV14_08980
MMR (mismatch excision repair)
Other MMR factors
CMV14_08980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
PcrA_UvrD_tudor
AAA_12
AAA_22
AAA_11
DUF3553
Motif
Other DBs
NCBI-ProteinID:
ATE64516
UniProt:
A0A2A4FV61
LinkDB
All DBs
Position
1865013..1867316
Genome browser
AA seq
767 aa
AA seq
DB search
MAFPNCSRVTQDIPAPEPGYLRGLNPPQREAVLTTEGPVLVLAGAGTGKTAALTARLAHL
VATRRAWPSEILAVTFTNKAAREMRERVGRLLGEAVEGMPWLGTFHSVAARMLRRHAELV
GLTPSFTILDTDDQLRLLKQLLAAADLDEKRWPARQLAGLIDRWKNRGLTPADIDAGEAE
QFANGRGGELYQQYQDRLRAVNACDFGDLLLHMLVILKSHRDVLADYQNRFRYVMVDEYQ
DTNSAQYLWLRLIAQERKNICCVGDDDQSIYSWRGAEVANILRFERDFPGATVIRLEQNY
RSTPHILAAASALIAHNGGRLGKTLWTEEGEGEKLRIVGIWDGPEEARRIGDEIEAHERG
GGKLDDVAILVRAQFQTREFEDRFIAIGLPYRIVGGFRFYERAEIRDALAYLRVVSQPAD
DLAFERIINTPKRGLGDKAVQKLHLLARAEDIPLTLAAARILGTDELTPQARRALGNLVG
DIARWRDLLSQLSHPELTRQILEESGYVAMLQNEKSTEADGRLENLNELARAMEDYETLG
EFLEHVSLVMDNDAEADTPKVTIMTIHAAKGLEFGTVFLPGWEEGVFPSQRSLDEGGLAS
LEEERRLGYVAITRARRRCTILHAANRRIYGQWTSSIPSRFVAELPEQHIETETTMSGGE
SLWRAQWSEHADPFAHVSRGTGRGPGWQRATAAGGLGKPQAGSRVVEARASAVSFAQPPR
KDIALGQRVFHSKFGYGAVVEIEGNKLEIDFEHAGRKRVLDSFVSLP
NT seq
2304 nt
NT seq
+upstream
nt +downstream
nt
atggcgttccctaactgttcgcgggtgactcaggacattcccgcccccgaacccggctat
ctgcgcgggctgaacccgccgcagcgcgaagccgtgctcaccaccgaggggccggtgctg
gtgcttgcgggcgcgggcaccggcaagactgcggcgctgaccgcgcgactggcccatctg
gtggcgacgcgccgtgcctggccgtcggagatcctggccgtcaccttcaccaacaaggcc
gcgcgcgagatgcgcgagcgggtcggccggctactcggcgaggcggtcgagggcatgccc
tggctcggcaccttccattcggtcgcggcgcggatgctgcgccgccatgccgaactcgtc
ggcctcacccccagcttcaccatcctcgacaccgacgaccagctgcgcctgctcaagcag
ctgctggccgccgccgacctcgacgagaagcgctggccggcacgccagctggccgggctg
atcgaccgctggaagaaccggggcctgacgccggccgatatcgacgcgggcgaggccgag
cagttcgccaatggccgtggcggcgagctctaccagcaatatcaggaccggctgcgcgcg
gtaaacgcctgcgatttcggcgatctgctgctccacatgctggtgatcctgaagagccat
cgcgacgtgctcgccgattaccagaaccgcttccgctatgtgatggtggacgaatatcag
gacaccaacagcgcccaatatctctggctccggctgatcgcgcaggagcgcaagaatatc
tgctgcgtcggcgacgacgaccagtcgatctattcgtggcgcggcgccgaggtggcgaac
atcctgcgcttcgaacgcgatttccccggtgcgacggtgatccggctggagcagaattac
cgatcgacgccgcatatcctggcggcggcaagcgcgctgatcgcgcataatggcggccgc
ctcggcaagacgttgtggaccgaggagggcgagggtgagaagctgcgcatcgtcggcatc
tgggacgggcccgaggaggcgcggcggatcggcgacgagatcgaggcacatgagcgcggc
ggcggcaagctcgacgatgtcgcgatcctggtccgcgcccagttccagacccgcgagttc
gaggaccgcttcatcgcgatcggcctgccttaccggatcgtcggcggcttccgcttctac
gaacgggccgagatacgcgacgcgctcgcctatctgcgcgtcgtcagccagcccgccgac
gacctagccttcgaacggatcatcaacacgcccaagcgcggccttggcgacaaggcggtg
cagaagctccacctgctcgcccgcgccgaggatatcccgctgaccctcgccgccgcccgc
atcctgggcaccgacgaactgaccccgcaggcgcgccgcgcgctcggcaacctcgtcggc
gacatcgcccgctggcgcgacctgctcagccagctgtcgcatcccgagctgacccgccag
atcctggaggagtcgggctatgtcgcgatgctccagaacgagaagtcgaccgaggccgac
gggcggctggagaatctcaacgagctggcccgggcgatggaggattatgagacgctcggc
gaattcctcgagcatgtcagtctggtgatggacaatgacgccgaggccgatacgcccaag
gtgacgatcatgacgatccacgccgccaaggggctggagttcggcaccgtcttcctcccc
ggctgggaggagggggtattcccctcgcagcgctcgctcgacgagggcgggctcgccagc
ctcgaggaggagcggcggctaggctatgtcgcgatcacccgcgcgcggcgccgctgcacc
atcctccatgccgccaatcgccgcatctacgggcaatggacctcgtcgatcccgtcgcgc
ttcgtcgccgaattgccggagcagcatatcgagaccgagacgaccatgtcgggcggcgaa
tcgctgtggcgcgcgcaatggtccgaacatgccgatcccttcgcccatgtcagccgtggc
acgggcagggggcctggctggcagcgcgcgaccgccgccggcggcctcggcaagccgcag
gcgggatcgcgcgtggtcgaggcgcgcgcctcggcggtgagcttcgcccagccaccgcgc
aaggacatcgcgcttggccagcgggtcttccacagcaaattcggctatggcgcggtcgtg
gagatcgagggcaacaagctggagatcgatttcgagcatgcgggccgcaagcgggtgctc
gacagtttcgtgagcctaccctga
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